PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650673.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 359aa MW: 41718 Da PI: 7.9204

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.3e-18	105	151	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll ++v+q+G + W+ Ia++++ gR +kqc++rw+++l XP_021650673.1 105 KGQWTIEEDRLLTQLVEQYGVRKWSHIAQMLP-GRIGKQCRERWHNHL 151 799***************************.***********97 PP
2	Myb_DNA-binding	53.5	5.4e-17	159	199	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W+++Ed+ l++a+++ G++ W+ Ia++++ gRt++++k++w+ XP_021650673.1 159 IWSEDEDKVLIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 199 6*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MDFYDYECKP FADINGGHGQ VMDNFQSGRY LNFPQNNPVD MMGYNQSNMS SNFQEMKPIN 60 FVVPDEVSSI TANHEYHKKV GLNKNRAQPS TRRTWKGRKK NNLVKGQWTI EEDRLLTQLV 120 EQYGVRKWSH IAQMLPGRIG KQCRERWHNH LRPDIKKDIW SEDEDKVLIQ AHAEIGNKWA 180 EIAKRLPGRT ENSIKNHWNA TKRRQYSKRK CRSKYPRGSL LQEYIKSLNL DPVPGRYQGT 240 MKLKAKGSGT NDATAVNTSS MKAPNQLQPQ DSDFFQNNNR LVPNCYDFNE VPDFDFDEKL 300 FQVGCSFDSL LDDIANYDHV VDEKSFEMDV AVEDVSPLFM DFEVKKELDL VEMISQAKM

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MDFYDYECKP FADINGGHGQ VMDNFQSGRY LNFPQNNPVD MMGYNQSNMS SNFQEMKPIN  60
FVVPDEVSSI TANHEYHKKV GLNKNRAQPS TRRTWKGRKK NNLVKGQWTI EEDRLLTQLV  120
EQYGVRKWSH IAQMLPGRIG KQCRERWHNH LRPDIKKDIW SEDEDKVLIQ AHAEIGNKWA  180
EIAKRLPGRT ENSIKNHWNA TKRRQYSKRK CRSKYPRGSL LQEYIKSLNL DPVPGRYQGT  240
MKLKAKGSGT NDATAVNTSS MKAPNQLQPQ DSDFFQNNNR LVPNCYDFNE VPDFDFDEKL  300
FQVGCSFDSL LDDIANYDHV VDEKSFEMDV AVEDVSPLFM DFEVKKELDL VEMISQAKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	2e-99	MYB family protein