PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650511.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 718aa MW: 78432.5 Da PI: 6.4434

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650511.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.5	8.8e-15	287	346	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021650511.1 287 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 346 57*****************666664478446***********************98 PP
2	AP2	46.6	8.3e-15	389	440	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021650511.1 389 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 440 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MASMNNWLGF SLYPQELSSQ SDHHQDHSQN TASRLGFHSD EISGTDVSGE CFNLASDSTA 60 PSLNLAASFG ILEAFRNNQS QDWNMKGLGM NPDSTYKTNS DLSMLMGTSC SSQNLDQNQE 120 PKLENFLGGH SLASHDHKLP GCNTMYNTSG DYMFQNCSLQ QAIPNDRTSN GEDTSSINTG 180 SNNSSVGLSM IKTWLRNQPA PTQQQETNNN GGVAQSLSLS MSTGSQSGSP LPLLAANTGE 240 SNNNGRDHSS SSDNNKQQKT TTGLDSQTST IEAVPRKSID TFGQRTSIYR GVTRHRWTGR 300 YEAHLWDNSC RREGQTRKGR QVYLGGYDKE EKAARAYDLA ALKYWGTTTT TNFPISNYEK 360 EIEEMKHMTR QEYVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT 420 FSTQEEAAEA YDIAAIKFRG LNAVTNFDMS RYDVNSILES SALPIGGAAK RLKDAEQAEM 480 TIGTQKTDNE NISSQLTDGI SSYGTAHHGW PTVAFQQPHH QPFSMHYPYG QRLWCKQEQD 540 TEANNHSFQD LHQLQLGNTH NFFQPSVFHN LMNMDSSSME HSSGSNSIMY SGGGGDGNSG 600 GNGSYQGMGC GSYAIPMATV IGNNDADQNQ GNGFGDGEVK AVGYENMLGT PDPYHARNLY 660 YLTQQSAGGG GGVVKGSAYD QGSACNNWLP TAVPTLLPRS SNMAVCHGAS TFTVWNDT

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MASMNNWLGF SLYPQELSSQ SDHHQDHSQN TASRLGFHSD EISGTDVSGE CFNLASDSTA  60
PSLNLAASFG ILEAFRNNQS QDWNMKGLGM NPDSTYKTNS DLSMLMGTSC SSQNLDQNQE  120
PKLENFLGGH SLASHDHKLP GCNTMYNTSG DYMFQNCSLQ QAIPNDRTSN GEDTSSINTG  180
SNNSSVGLSM IKTWLRNQPA PTQQQETNNN GGVAQSLSLS MSTGSQSGSP LPLLAANTGE  240
SNNNGRDHSS SSDNNKQQKT TTGLDSQTST IEAVPRKSID TFGQRTSIYR GVTRHRWTGR  300
YEAHLWDNSC RREGQTRKGR QVYLGGYDKE EKAARAYDLA ALKYWGTTTT TNFPISNYEK  360
EIEEMKHMTR QEYVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV AGNKDLYLGT  420
FSTQEEAAEA YDIAAIKFRG LNAVTNFDMS RYDVNSILES SALPIGGAAK RLKDAEQAEM  480
TIGTQKTDNE NISSQLTDGI SSYGTAHHGW PTVAFQQPHH QPFSMHYPYG QRLWCKQEQD  540
TEANNHSFQD LHQLQLGNTH NFFQPSVFHN LMNMDSSSME HSSGSNSIMY SGGGGDGNSG  600
GNGSYQGMGC GSYAIPMATV IGNNDADQNQ GNGFGDGEVK AVGYENMLGT PDPYHARNLY  660
YLTQQSAGGG GGVVKGSAYD QGSACNNWLP TAVPTLLPRS SNMAVCHGAS TFTVWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-143	AP2 family protein