PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021650056.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 371aa MW: 39903.5 Da PI: 5.0639

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021650056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.7e-17	52	97	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + XP_021650056.1 52 KGPWSPEEDAILSRLVSKFGARNWSLIARGIA-GRSGKSCRLRWCNQ 97 79****************************.*********985 PP
2	Myb_DNA-binding	54.9	2e-17	104	148	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +++ a++ +G++ W+ Iar ++ gRt++ +k++w++ XP_021650056.1 104 RKPFTDEEDHIIAAAHAVHGNK-WAVIARLLP-GRTDNAIKNHWNST 148 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MEIDLKEKTF VEVDGTNSGD GGGEDGAGSG DDLLLAVGEG GGSGQACRDR VKGPWSPEED 60 AILSRLVSKF GARNWSLIAR GIAGRSGKSC RLRWCNQLDP AVKRKPFTDE EDHIIAAAHA 120 VHGNKWAVIA RLLPGRTDNA IKNHWNSTLR RRSTERERLR LASGNVDQDA TLDKAKASSE 180 ETLSCGDANS FKSFEGKDGS SLDNMNDQCE EKAPLEVPSN NEAKESSTLF RPRARVSAFS 240 VYNPVDGPEI ASPCSRPVPM VGPLIQASIP DDGICKLLDG IYNERLVPQQ CGHGCCEAQN 300 GNNPRNSLLG PEFVDFLDPP SFPSFELAAI ATDISNLAWL KSGLENNSVR VMGDTAGRIA 360 PYGSQAQMGH L

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MEIDLKEKTF VEVDGTNSGD GGGEDGAGSG DDLLLAVGEG GGSGQACRDR VKGPWSPEED  60
AILSRLVSKF GARNWSLIAR GIAGRSGKSC RLRWCNQLDP AVKRKPFTDE EDHIIAAAHA  120
VHGNKWAVIA RLLPGRTDNA IKNHWNSTLR RRSTERERLR LASGNVDQDA TLDKAKASSE  180
ETLSCGDANS FKSFEGKDGS SLDNMNDQCE EKAPLEVPSN NEAKESSTLF RPRARVSAFS  240
VYNPVDGPEI ASPCSRPVPM VGPLIQASIP DDGICKLLDG IYNERLVPQQ CGHGCCEAQN  300
GNNPRNSLLG PEFVDFLDPP SFPSFELAAI ATDISNLAWL KSGLENNSVR VMGDTAGRIA  360
PYGSQAQMGH L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-108	MYB family protein