PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021649816.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GATA | ||||||||
Protein Properties | Length: 266aa MW: 28404.9 Da PI: 5.174 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.7 | 1.2e-16 | 176 | 212 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cgt++ Tpl+Rrgp g++tLCnaCGl+++ kgl XP_021649816.1 176 CNHCGTSSksTPLMRRGPAGPRTLCNACGLKWANKGL 212 *********************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MPNSNIEAPL YTAETMNIQT HLEEEDEDMV GGGEESVENP NIHYENGNGT DGGVDGVLPS 60 GIRDTGGPDY PLVVANGGNA DQLTLSFQGE VYVFDAVAPD KQVQAVLLLL GGCEIPSSIP 120 TAGTVPLNLR VPSDLPGRSI QPQRAASLHR FREKRKELCF DKKIRYSVRK EVALRCNHCG 180 TSSKSTPLMR RGPAGPRTLC NACGLKWANK GLLRDLSKIS RMAIQGPPAK SIEQSEGKAN 240 GMDAVTVAAD IVSSFNGDNS TLTAET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 4e-57 | GATA family protein |