PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021649617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 1220aa MW: 136253 Da PI: 6.1121 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.4 | 5e-11 | 439 | 483 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT+eEd++l+ v++ G+ +W Ia+ +gk+Rt+ qc r+q XP_021649617.1 439 SKWTAEEDKKLLFIVQEKGMTNWLDIAASLGKNRTPFQCLARFQR 483 58***************************************9995 PP | |||||||
2 | Myb_DNA-binding | 39.3 | 1.5e-12 | 492 | 535 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd +l av +G ++W ++a+t+ gRt+ qc +rw k XP_021649617.1 492 REWTKEEDAQLRIAVGTYGEHDWQSVASTLE-GRTGTQCSNRWKK 535 68*****************************.***********87 PP | |||||||
3 | Myb_DNA-binding | 47.2 | 5.2e-15 | 544 | 588 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT +E ++l+ av ++G+++W++Iar ++ Rt+ qc++rw + XP_021649617.1 544 KGKWTLDERKRLKVAVMLFGPRNWNKIARFVP-ERTAPQCRERWVN 588 79******************************.***********76 PP | |||||||
4 | Myb_DNA-binding | 50.7 | 4.1e-16 | 597 | 641 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++WT+eEd++l+ a++++G W++Ia++++ Rt+ qc+ rw +l XP_021649617.1 597 DKWTEEEDLRLKAAIEEYGYC-WAKIAKCLP-PRTDSQCRRRWKVLL 641 69*****************99.*********.9**********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1220 aa Download sequence |
MSSLLQNDDA DQDLCSDDDE IDDGFNDDIE ALRRACTLTG TNLSDVNIDN GENNRSLSAE 60 GDGDSYSGEG EEDEDDFKLF RIIQNRFSFG TDSCEPIYSK PLCAFPLDFD DEEDDFETLC 120 AVRKRFSAYD NSDISEGKLE NLAEKSEGVD ASSVVSKLVT SDDSVIDRTA CKVFPDTEEG 180 LNSTLLSDNM EIQPSGYIEQ QHSLDACKFS SLGRKDSSSF PKSAQVFIDA IKKNRSCQKF 240 LRKKLAHIEA RIEENKKLKE RVKILRDFQV SCKKITGRAL AQGKDPRIQL ISTPRISNSR 300 DSKVNDKKVS TMHNGPPENS HVANYRMALT NFPLNLNRKN WTEAEKENLQ KGIRQQFQEM 360 VLQFSVDQLS GSEGSPGNVN DLDAVLASIR EMEITPERIR EFLPKVNWDQ LASLYVVGRS 420 GAECEAKWLN SEDPLINHSK WTAEEDKKLL FIVQEKGMTN WLDIAASLGK NRTPFQCLAR 480 FQRSLNAHII KREWTKEEDA QLRIAVGTYG EHDWQSVAST LEGRTGTQCS NRWKKSIHPG 540 NGRKGKWTLD ERKRLKVAVM LFGPRNWNKI ARFVPERTAP QCRERWVNSE DPSLNMDKWT 600 EEEDLRLKAA IEEYGYCWAK IAKCLPPRTD SQCRRRWKVL LPHEVPLLQA ARKTQKVAII 660 GNFVDRESER PALGPHDFVP LPMITSAFEP EKQNQSRKRK RKSREGEVSG KKKNAAPGNT 720 SKRLQSKRPN EGMQISSVED PGITNGTEVA TFGESGMVVT KSSSSEKNPH MKTYQDIADA 780 QDGDPKKKKK LPKLPLKRNV LVEIAGNSQS CLLSHPESLE LGISNVDGLQ TFGGESETSS 840 EKRKVQEQHS EANTCTNTGE EEGSEPITDV IELDHDHCDS NVLAVNIVDQ DETVGQPDAS 900 NKEVTNLSLE GKAFMELADS NCLTLPPENL EARVTNAGGV EKSSLDGISL IKASKAPNCT 960 SKSSTELSGQ CNFVVSNPCH HDGHRKSKLS KSSNKQVLED NGKLASFCQK ISKKRRLRVD 1020 KNDKQILETN DEDDVTLASF CRSISKKRRV RVVKNADQTC PPSDLVSKRV YQHDYPNKMP 1080 SFMLDGEAQT CYSGGFAENV LLEEPSVVDT AKTDAPQEPM RKPISIDHDS DLEMSDITLA 1140 SLLHNKQKRK GQVLAKSRDQ PHSLSRMKKR STPLAKGVVQ CCNGRMLETS SGCEIQSCGT 1200 SSIPTITGDD KEPDGQDVAD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 697 | 702 | RKRKRK |
2 | 697 | 713 | RKRKRKSREGEVSGKKK |
3 | 698 | 714 | RKRKRKSREGEVSGKKK |
4 | 785 | 791 | PKKKKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 0.0 | MYB family protein |