PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021648990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | FAR1 | ||||||||
Protein Properties | Length: 208aa MW: 23508.1 Da PI: 9.8017 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 43.5 | 1e-13 | 46 | 124 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+++A+ GFsv k+ +k r + + +t C k k+ ek+ +++++C a+++ ++++g w+vtk+ +eHnH++ XP_021648990.1 46 EFYRQHARLKGFSVAKKCASKG-RGEVYKYQTISCDKGRKAYAEKS----------SKKINCPARVNAILKDNGMWQVTKIISEHNHDMD 124 6**************9988776.55556667778877666655544..........69*****************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MGDMNRGNSG RLIQQVLGCS KDDSIFNESD GEMNQGVVDE VDSLYEFYRQ HARLKGFSVA 60 KKCASKGRGE VYKYQTISCD KGRKAYAEKS SKKINCPARV NAILKDNGMW QVTKIISEHN 120 HDMDPLMSRF MAGHRKITPN LKRILKANDI CGIRPCKSIR ILEVQVGGTE NLICMPKDCR 180 NFIQSKRRLR LEEGNAEAIR GLFSSSAW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76320.2 | 4e-10 | FAR1 family protein |