PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648863.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 346aa MW: 38744 Da PI: 8.4506

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	14	63	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++ ++R++k+c++rw++yl XP_021648863.1 14 KGPWSPEEDAKLKAYIEKHGTGgNWIALPQKIAgLKRCGKSCRLRWLNYL 63 79**********************************************97 PP
2	Myb_DNA-binding	37.4	6e-12	70	112	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_021648863.1 70 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 112 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KHGTGGNWIA LPQKIAGLKR CGKSCRLRWL 60 NYLRPNIKHG GFSEEEDNII CSLYISIGSR WSIIAAQLPG RTDNDIKNYW NTKLKKKLLG 120 KQRKEQLGRR GSGLKQGRKR VNANPMFSVD HNNNQNPHWP ELPLLDPIPY SIQEPRFNDH 180 ASIRKLLVKL GGRFSDDDQL IRNTATNSHQ IPYDISYTPQ LHDQPINVSS SASVDALNDT 240 ALQFPQALYN IDGGGLQMMQ GQSNLPVGIE EMGYNNNPQR LDGLEFLLGE DMLNYIIGTT 300 SGENIVGSSG EMSSLVYPPM ASNCEEIQQR LLQECALEKL RYPAAL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KHGTGGNWIA LPQKIAGLKR CGKSCRLRWL  60
NYLRPNIKHG GFSEEEDNII CSLYISIGSR WSIIAAQLPG RTDNDIKNYW NTKLKKKLLG  120
KQRKEQLGRR GSGLKQGRKR VNANPMFSVD HNNNQNPHWP ELPLLDPIPY SIQEPRFNDH  180
ASIRKLLVKL GGRFSDDDQL IRNTATNSHQ IPYDISYTPQ LHDQPINVSS SASVDALNDT  240
ALQFPQALYN IDGGGLQMMQ GQSNLPVGIE EMGYNNNPQR LDGLEFLLGE DMLNYIIGTT  300
SGENIVGSSG EMSSLVYPPM ASNCEEIQQR LLQECALEKL RYPAAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	140	RRGSGLKQGRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	5e-75	MYB family protein