PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648647.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 364aa MW: 40681.3 Da PI: 10.3359

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	153.2	1.6e-47	90	229	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa....seceaesssssasnsssg.... 88 ++kkdrhski+T++g+RdRRvRls+e+a++fFdLqd+LGfdk+skt+eWLl ++k+aike ++++ ++ s+ce +s++ ++ +g XP_021648647.1 90 PVKKDRHSKIYTAQGLRDRRVRLSIEIARKFFDLQDMLGFDKASKTLEWLLSKSKKAIKEVAQNGGAKSlcstSACEVASENGEQ----KGivlk 180 68************************************************************444442222334222222222....223455 PP TCP 89 ......kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 + ++++++++ +++ + + +akesrakarararertr km+++ XP_021648647.1 181 seslagRVCNEKKTKRLQKAAS--SNLVAKESRAKARARARERTRVKMCTR 229 5556445555554444444444..478888*****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MFPSTNSISP FPHLSSSFYD LSPYIIDHEA NDLFLQHHHP LTVPSLPVTE TLLQTPASNN 60 AMISNIKQDI NVGFSGNQHD PRVFLPGKKP VKKDRHSKIY TAQGLRDRRV RLSIEIARKF 120 FDLQDMLGFD KASKTLEWLL SKSKKAIKEV AQNGGAKSLC STSACEVASE NGEQKGIVLK 180 SESLAGRVCN EKKTKRLQKA ASSNLVAKES RAKARARARE RTRVKMCTRR FHESKHPDPT 240 SSNNYLSRST LTQQHQACDK SHNGLKVVAL PHHDQVEQPD SHSSLANLVP KGNIIEESIV 300 IKRKLKPSTM TDYQQNLVML KEVTCNNSNL PNLPQNWDIN SAIARSSFCA ITNVNRSKGL 360 HLYG

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MFPSTNSISP FPHLSSSFYD LSPYIIDHEA NDLFLQHHHP LTVPSLPVTE TLLQTPASNN  60
AMISNIKQDI NVGFSGNQHD PRVFLPGKKP VKKDRHSKIY TAQGLRDRRV RLSIEIARKF  120
FDLQDMLGFD KASKTLEWLL SKSKKAIKEV AQNGGAKSLC STSACEVASE NGEQKGIVLK  180
SESLAGRVCN EKKTKRLQKA ASSNLVAKES RAKARARARE RTRVKMCTRR FHESKHPDPT  240
SSNNYLSRST LTQQHQACDK SHNGLKVVAL PHHDQVEQPD SHSSLANLVP KGNIIEESIV  300
IKRKLKPSTM TDYQQNLVML KEVTCNNSNL PNLPQNWDIN SAIARSSFCA ITNVNRSKGL  360
HLYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	2e-31	TCP family protein