PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648556.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 280aa MW: 31111.7 Da PI: 7.7182

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_021648556.1 105 FSCNYCQRKFYSSQALGGHQNAH 127 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MEPPRSEVCL SETSSIISVS NAPPTPSLKA SMDNQKEVKQ LGGEELEEEE QRDQKHQEDD 60 LVLDLSLTSK DSKPELNLID SFDMESSQKS SLDTPQGNET EPRIFSCNYC QRKFYSSQAL 120 GGHQNAHKRE RTLAKRGQRI STGSFGLGHH PNSHLNRYTS MASLPLHGSL NRSLGIQVHS 180 MIHKPTFLPS STLGSTNIYG QNGWSRQPIQ QPAVGRLASE SFYMETNKGS SPSNGVARFE 240 TARKFSPAKE GIGGFWWDAG VNHLKTKRDD LQKLDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	2e-49	C2H2 family protein