PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021648554.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 666aa    MW: 73986.5 Da    PI: 6.3006
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021648554.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS422.14.7e-1292856501373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv+ L++c+ea+ s++++l+++++a+l +lasp+g+++ Rl ay+teALa r++r ++++++  +p+e + +  +++ +al+l+++vsPi+kf h
  XP_021648554.1 285 LVSFLTACVEAIGSKNMALINHCIAKLGDLASPKGTAFSRLSAYYTEALALRVTRLWPHVFHFTTPREFD-RVDDDSGTALRLLNQVSPIPKFIH 378
                     5788****************************************************************98.5678888999************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taN+ +l+a+eg++rvHiiDfdi+qGlQWp+Llq+LasR+++p ++RiTg+g+    sk+el+etg+rLa fAe+l+++fef++ v++rled++
  XP_021648554.1 379 FTANEILLRAFEGKDRVHIIDFDIKQGLQWPSLLQSLASRTNPPSHVRITGIGE----SKQELNETGDRLAGFAEALNLHFEFHP-VVDRLEDVR 468
                     ******************************************************....***************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l++L+vk+gE++++n+++q+h++l +    +   +++L l++s++P ++ ++eqea+hn++++ +r++++l+yysa+fds+++++p +s  rik+
  XP_021648554.1 469 LWMLHVKEGECVVINCIFQMHKTLYDGNGGA--LRDFLGLIRSTNPSIILMAEQEAEHNAPNLEARVCNSLKYYSAIFDSINSSVPLDSPVRIKI 561
                     ************************6554444..589*********************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee..sgslvlgWkdrpLvsvSaW 373
                     E++ ++rei+n+vaceg++r erhe++ekW + +e+ G++ + +se+++ q ++ll++++ + yrv+++  +++l+l W d+pL+++SaW
  XP_021648554.1 562 EEM-FAREIRNIVACEGSDRLERHESFEKWIKLMEQGGLRCMGVSEREVLQSQMLLKMYSCEDYRVKQRqdRAALTLSWLDQPLYTISAW 650
                     ***.********************************************************888****652267788************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 666 aa     Download sequence    
MLAGCSSSTL LSPRHRLRSE SPAQFQACHF QLPSMSTQRL DLPCTFSRTE SSRPQPIRPV  60
GVGLSVDKSL ESKTSSCSLK RNIRLPPLAT STQSEKDEFW EKGKSLKRLA EQGSLDDSCT  120
NRAKRKRGSN DNGKSGDVHE GGDTLTLGQL GSGNFWFQSG FEVPRALNPP QAPFSLTCSG  180
DEERVCFVPG EVISPPCPLS KNPWLGSVVT EITDLGEKEG ESSQRPAKEA SGSSPSSESH  240
VLGLRLSEKV VEHEVGNGSR NPHPQEGTTA EAAEENHQEY QAFELVSFLT ACVEAIGSKN  300
MALINHCIAK LGDLASPKGT AFSRLSAYYT EALALRVTRL WPHVFHFTTP REFDRVDDDS  360
GTALRLLNQV SPIPKFIHFT ANEILLRAFE GKDRVHIIDF DIKQGLQWPS LLQSLASRTN  420
PPSHVRITGI GESKQELNET GDRLAGFAEA LNLHFEFHPV VDRLEDVRLW MLHVKEGECV  480
VINCIFQMHK TLYDGNGGAL RDFLGLIRST NPSIILMAEQ EAEHNAPNLE ARVCNSLKYY  540
SAIFDSINSS VPLDSPVRIK IEEMFAREIR NIVACEGSDR LERHESFEKW IKLMEQGGLR  600
CMGVSEREVL QSQMLLKMYS CEDYRVKQRQ DRAALTLSWL DQPLYTISAW APLDVVGSSS  660
SFSQPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein