PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021648239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 283aa MW: 32367.3 Da PI: 8.4324 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.7 | 2.7e-08 | 21 | 66 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT eE + + +a + + + +W+++a++++ g+t +++ ++ XP_021648239.1 21 EWTREENKEFERALAIYDEHepdRWTKVAAMIP-GKTVVDVIKQYRE 66 7*****************99*************.*******999986 PP | |||||||
2 | Myb_DNA-binding | 39.5 | 1.3e-12 | 121 | 165 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ +++ + ++G+g+W+ I+r + +t+ q+ s+ qky XP_021648239.1 121 PWTEDEHRRFLLGLLKHGKGDWRNISRNFVVSKTPTQVASHAQKY 165 8*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
METSYPSLYM SNSNWFSQST EWTREENKEF ERALAIYDEH EPDRWTKVAA MIPGKTVVDV 60 IKQYRELEED VCNIEAGKVA IPGYLSSPFT LDWIENRNFD AYRKKPLATK NGDQERKKGV 120 PWTEDEHRRF LLGLLKHGKG DWRNISRNFV VSKTPTQVAS HAQKYFIRQQ LSGAKDKRRP 180 SIHDITTVNL TNTTPADSNK PPSPDQSNTL LSQNPIGMQE MLIDWSQSKH GSIMVFDATL 240 GNLFVSSPSD IASNGLKLQE QNRYAGAHIN PHNLVFQRHQ IHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05790.1 | 1e-88 | MYB family protein |