PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021648025.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 1011aa MW: 108913 Da PI: 4.2994

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021648025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00046	20	42	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++Cg +F++++ rH rtH XP_021648025.1 20 HICHKCGWPFPNPHPSARHRRTH 42 68********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1011 aa Download sequence
MNNQDHRKNH TPGHESPGVH ICHKCGWPFP NPHPSARHRR THKKICGTIQ GYKLVDSEAS 60 AHSTISDDEQ LSDEDRKTPA TIPPSSNSAN SSQMQNTEVQ GSNLSVRAQQ SQDHVSSATT 120 SFMDRSLTDC RNEESVYEPN NDKGGSTCDS NPNQLGTQTD ASWENYEKTA SEDLAESDAK 180 GNEGAKTITN NADDDLTEID TNANEEMNLD RCLVDAEVSP CDNVGEASEI VSKQGKIEDT 240 TSDPLAAARV IQLKEQSNDE LDSKISLNAL PPEVKSVENV NTSTGTAQVK VDAAQGMDSA 300 SSGELIELKN GQGEGNDNVH VLSVPDDIPV VDNAEIMIRG FKDYKGGALP QLVVADSFKV 360 INDKDNSSNF CSSLLNEGTE VSALDMHVLK DDLEQKGESS EHIVENFPDE TETIMPQVKM 420 TANESQRTEQ IDALTDAAAT GIEKNCSVQC PGEQPPSDYH KSSSQTSSVE HATEVFSDVN 480 PVAVQLNSEF RQTTNFGGAD DAGDYEKGKI IRCDIAENED KRITDESCTE NIIATSEPSS 540 LSELTVNAVT KSFGGEDAAD HEGGKVESYY VSKTETEEGY STIRSIEGKL SVKTAVMPES 600 AKSVHESNVT SENVINASER NLSENECIQL SRVSDHQEGV KELESTGNRK VQVDGADRAS 660 AAAESSNVGD NDELQKSSDN VGDVEVLQRP LDKIDDVEVL QKSSEDVTKE PQLSPLDTSS 720 SIQNCAPVGD NSAGDNSAGD FVRVVSENRS ESSPNEGESK FAAQQLGASA IDFSVDSGSQ 780 TDSLEGQWGS ASASVLSTQS DMPVIVDAEA SNGTKASVEA EKADLKEPKA LSERQHSDKS 840 DVFEPPSFMT LVEPRDGDKA AASEIQTVQN LNQPAGWFPS LTHVTNESQG RKKNEEIIAK 900 VSNWSTGKQH SPLKNILGEA NMETKSKSPN AKENPPPVVE KDESSAKDNN ASATTVNSNV 960 GSQVPVAEAV KKDAGKEWNS PARYPTDIKR EKRKVKGRPY WAQFVCCSSV N

Sequence ? help Back to Top

Protein Sequence Length: 1011 aa Download sequence

MNNQDHRKNH TPGHESPGVH ICHKCGWPFP NPHPSARHRR THKKICGTIQ GYKLVDSEAS  60
AHSTISDDEQ LSDEDRKTPA TIPPSSNSAN SSQMQNTEVQ GSNLSVRAQQ SQDHVSSATT  120
SFMDRSLTDC RNEESVYEPN NDKGGSTCDS NPNQLGTQTD ASWENYEKTA SEDLAESDAK  180
GNEGAKTITN NADDDLTEID TNANEEMNLD RCLVDAEVSP CDNVGEASEI VSKQGKIEDT  240
TSDPLAAARV IQLKEQSNDE LDSKISLNAL PPEVKSVENV NTSTGTAQVK VDAAQGMDSA  300
SSGELIELKN GQGEGNDNVH VLSVPDDIPV VDNAEIMIRG FKDYKGGALP QLVVADSFKV  360
INDKDNSSNF CSSLLNEGTE VSALDMHVLK DDLEQKGESS EHIVENFPDE TETIMPQVKM  420
TANESQRTEQ IDALTDAAAT GIEKNCSVQC PGEQPPSDYH KSSSQTSSVE HATEVFSDVN  480
PVAVQLNSEF RQTTNFGGAD DAGDYEKGKI IRCDIAENED KRITDESCTE NIIATSEPSS  540
LSELTVNAVT KSFGGEDAAD HEGGKVESYY VSKTETEEGY STIRSIEGKL SVKTAVMPES  600
AKSVHESNVT SENVINASER NLSENECIQL SRVSDHQEGV KELESTGNRK VQVDGADRAS  660
AAAESSNVGD NDELQKSSDN VGDVEVLQRP LDKIDDVEVL QKSSEDVTKE PQLSPLDTSS  720
SIQNCAPVGD NSAGDNSAGD FVRVVSENRS ESSPNEGESK FAAQQLGASA IDFSVDSGSQ  780
TDSLEGQWGS ASASVLSTQS DMPVIVDAEA SNGTKASVEA EKADLKEPKA LSERQHSDKS  840
DVFEPPSFMT LVEPRDGDKA AASEIQTVQN LNQPAGWFPS LTHVTNESQG RKKNEEIIAK  900
VSNWSTGKQH SPLKNILGEA NMETKSKSPN AKENPPPVVE KDESSAKDNN ASATTVNSNV  960
GSQVPVAEAV KKDAGKEWNS PARYPTDIKR EKRKVKGRPY WAQFVCCSSV N