PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647912.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 563aa MW: 61979.4 Da PI: 9.2403

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647912.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.6e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_021647912.1 79 FVCEICNKGFQRDQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	15.4	5.2e-05	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ XP_021647912.1 155 WKCDKCSKKYAVQSDWKAHQKTC 177 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 563 aa Download sequence
MSNITGDEGS FSYQQLQQKQ QQLQNHFHGS NSGATNSNGS TSQQQQQPVK KKRNLPGTPD 60 PNAEVIALSP TTLMATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLRQR STAEVKKRVY 120 ICPEKTCVHH NPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVQSDW KAHQKTCGTR 180 EYKCDCGTIF SRRDSFITHR AFCDALAEEN NKVNQGLMPN MGSNLQTQMP DIMSSIPLTS 240 INTISTSIGI SDFNSFDPKN PLKSLPQELV PMPFKPMNMA AGRGMFSSSS GTIFGGPRST 300 ASTSSSLQLS SNSSSGYNYL QDAKNGCQIS GSAHMSATAL LQKAAQMGST ASNSINSPMM 360 QKSFASSMPV PDQMSSIRPP SYGGVQQHSA TSYDHFPSQP EQTSMVGINT RGGGFNNNNN 420 QPLQKGPQEV LQFFEATTGS SSGMNDMGMF SGMVMGIEQN PGFMENTDHE DSDNSSLIHG 480 RAGTDRIPSG PSRFAVSSGE VGDMMTRDFM GIGGSRTSNF HYHQRQRVEM EAMSQQQRIP 540 MMNHFQQQLS LGESAMDKPI WDV

Sequence ? help Back to Top

Protein Sequence Length: 563 aa Download sequence

MSNITGDEGS FSYQQLQQKQ QQLQNHFHGS NSGATNSNGS TSQQQQQPVK KKRNLPGTPD  60
PNAEVIALSP TTLMATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLRQR STAEVKKRVY  120
ICPEKTCVHH NPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVQSDW KAHQKTCGTR  180
EYKCDCGTIF SRRDSFITHR AFCDALAEEN NKVNQGLMPN MGSNLQTQMP DIMSSIPLTS  240
INTISTSIGI SDFNSFDPKN PLKSLPQELV PMPFKPMNMA AGRGMFSSSS GTIFGGPRST  300
ASTSSSLQLS SNSSSGYNYL QDAKNGCQIS GSAHMSATAL LQKAAQMGST ASNSINSPMM  360
QKSFASSMPV PDQMSSIRPP SYGGVQQHSA TSYDHFPSQP EQTSMVGINT RGGGFNNNNN  420
QPLQKGPQEV LQFFEATTGS SSGMNDMGMF SGMVMGIEQN PGFMENTDHE DSDNSSLIHG  480
RAGTDRIPSG PSRFAVSSGE VGDMMTRDFM GIGGSRTSNF HYHQRQRVEM EAMSQQQRIP  540
MMNHFQQQLS LGESAMDKPI WDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-100	C2H2 family protein