PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647855.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 1062aa MW: 117115 Da PI: 9.0276

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647855.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.7	3.4e-07	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e++++ g+t +qV+ +F +R + +k XP_021647855.1 69 KRPRDLLNPKAIKYMQAVFSIKDAISKKESREISAQFGVTVTQVRDFFASQRSRVRK 125 799**************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1062 aa Download sequence
MEALKENLEE IEIGSSVESF HRFLGSQKEL FHSQIDQLQR IVVNQCKLTG VNPLSQEMAA 60 GAMSIKIGKR PRDLLNPKAI KYMQAVFSIK DAISKKESRE ISAQFGVTVT QVRDFFASQR 120 SRVRKLVHLS REKAARTNSC KEPQDGVSAS SDPMIPIDLA PLNSVHPDPV PLNSVHPDPV 180 PLNSVGPDLS PIYPAGPSNA DEAPSCSTQG DVLPGLNDSD KHFVENIFIW LRKEETFSGQ 240 VKLMEWILQI QNPSVLNWFL TKGGVMILAT WLSQAAVEEQ TSILLVALKV LCHLPLHRAL 300 PEHMSAILHS VNKLRFYRTS DISNRARVLL SRWSKIFARE AMKKPNGVKS SIDAQEMILK 360 QSIDEIMGNE LWQPNVGNPE DVLALSESSE NTRKIEPSQT LKLLTASTDD SSRKHALGVS 420 HTRERRKVQL VEQPGQKTAG RSPQATKAVS VSQSRPMSTD DIQKAKMRAL FMQGKHGKTV 480 SSSNGANSMK TESSNKPSNT PFCSLIPASK IPPHPKIGEP EKPVIVPPKI SDKQEGHLDP 540 KHKMNSKEPL GELCRRVQIP WQTPSEIKLN SLWRVGIGEN SKEVDGQKNR NRRELETIYR 600 TAQDIPSNPR EPWDREMDYD DTLTPDIPIE QPPDADVAET QVSHNENTVN NTVVAQAPSL 660 PQIIGGGAAE PDLELLAVLL KNPELVIALT SGQAGNLSTE ETVKLLDMIK RNGAGLASCL 720 NGFSGKIEER VEVSLPSPTP SSNSGTSGWR PEDAKNPFSQ QGSGGNRIAF TDPGVPTYIS 780 TVDKLTGLVQ SQNQARNISM PQQQASLQLP LQHQQVYGAI PPFSWPQTTS TIPENRQPSM 840 VLPSHQSLPT NSSILQTPVS EMGLATKNLP VISPNLHNFS ATAGPSVRIE TVNNVKPAPI 900 VSFAMNTPDR QAVPFPMPIA TPTPAHSHPL ISEPALVHSS RPSTGNMGSM PDSWRGRQGL 960 ATSSPSQVNR TNYDASLRGP VQPHLQSGPP WERNEYAGDE GFESWSPENS PVRSPEYMHG 1020 RNYQGSRMNP RWNYTPDNRS RQRNYSGNRD NNRNGNGNRR WR

Sequence ? help Back to Top

Protein Sequence Length: 1062 aa Download sequence

MEALKENLEE IEIGSSVESF HRFLGSQKEL FHSQIDQLQR IVVNQCKLTG VNPLSQEMAA  60
GAMSIKIGKR PRDLLNPKAI KYMQAVFSIK DAISKKESRE ISAQFGVTVT QVRDFFASQR  120
SRVRKLVHLS REKAARTNSC KEPQDGVSAS SDPMIPIDLA PLNSVHPDPV PLNSVHPDPV  180
PLNSVGPDLS PIYPAGPSNA DEAPSCSTQG DVLPGLNDSD KHFVENIFIW LRKEETFSGQ  240
VKLMEWILQI QNPSVLNWFL TKGGVMILAT WLSQAAVEEQ TSILLVALKV LCHLPLHRAL  300
PEHMSAILHS VNKLRFYRTS DISNRARVLL SRWSKIFARE AMKKPNGVKS SIDAQEMILK  360
QSIDEIMGNE LWQPNVGNPE DVLALSESSE NTRKIEPSQT LKLLTASTDD SSRKHALGVS  420
HTRERRKVQL VEQPGQKTAG RSPQATKAVS VSQSRPMSTD DIQKAKMRAL FMQGKHGKTV  480
SSSNGANSMK TESSNKPSNT PFCSLIPASK IPPHPKIGEP EKPVIVPPKI SDKQEGHLDP  540
KHKMNSKEPL GELCRRVQIP WQTPSEIKLN SLWRVGIGEN SKEVDGQKNR NRRELETIYR  600
TAQDIPSNPR EPWDREMDYD DTLTPDIPIE QPPDADVAET QVSHNENTVN NTVVAQAPSL  660
PQIIGGGAAE PDLELLAVLL KNPELVIALT SGQAGNLSTE ETVKLLDMIK RNGAGLASCL  720
NGFSGKIEER VEVSLPSPTP SSNSGTSGWR PEDAKNPFSQ QGSGGNRIAF TDPGVPTYIS  780
TVDKLTGLVQ SQNQARNISM PQQQASLQLP LQHQQVYGAI PPFSWPQTTS TIPENRQPSM  840
VLPSHQSLPT NSSILQTPVS EMGLATKNLP VISPNLHNFS ATAGPSVRIE TVNNVKPAPI  900
VSFAMNTPDR QAVPFPMPIA TPTPAHSHPL ISEPALVHSS RPSTGNMGSM PDSWRGRQGL  960
ATSSPSQVNR TNYDASLRGP VQPHLQSGPP WERNEYAGDE GFESWSPENS PVRSPEYMHG  1020
RNYQGSRMNP RWNYTPDNRS RQRNYSGNRD NNRNGNGNRR WR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein