PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647541.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 525aa MW: 58177.7 Da PI: 6.5046

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.8e-07	273	294	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_021647541.1 273 FCTICGKGFKRDANLRMHMRGH 294 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MDKKDRLCQE TWAKSSSSGN ELPKNISTEK PSFINFNFNS QQYEQKWEDT SIFGSRTNSS 60 FQEFNPQSET QSLLPSNPND HIKMADQENS QINETLQTNK IPDWDPRAML NNLSFLEQKI 120 HQLQDLVHLI VGRRGQVLGR PEELVTQQQQ LVTADLTSII VQLISTAGSL LPSVKHTLSA 180 TTTPVGQLGG ILFPSGTGMN NSVQQQHSSG SKVSDQSNQM DVTGNCGTEQ NYSIEEHEMK 240 DEEDAEEGEN LPPGSYEILQ LEKEEILAPH THFCTICGKG FKRDANLRMH MRGHGDEYKT 300 PAALAKPNKE ASSEPVLIKR YSCPFTGCKR NKDHKKFQPL KTILCVKNHY KRTHCDKSYT 360 CSRCNTKKFS VIADLKTHEK HCGKDKWLCS CGTTFSRKDK LFGHIALFQG HTPAIPPDET 420 KGPAGPSDKG DENEVANKVG SINYSFGSGG ANGTGAQNVM DVKGGVDDPA SYFSPLNFDT 480 CNFGGFHEFP RPPFDDSESS FSFLISGLCN YSQKTGGESS SNNIQ

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MDKKDRLCQE TWAKSSSSGN ELPKNISTEK PSFINFNFNS QQYEQKWEDT SIFGSRTNSS  60
FQEFNPQSET QSLLPSNPND HIKMADQENS QINETLQTNK IPDWDPRAML NNLSFLEQKI  120
HQLQDLVHLI VGRRGQVLGR PEELVTQQQQ LVTADLTSII VQLISTAGSL LPSVKHTLSA  180
TTTPVGQLGG ILFPSGTGMN NSVQQQHSSG SKVSDQSNQM DVTGNCGTEQ NYSIEEHEMK  240
DEEDAEEGEN LPPGSYEILQ LEKEEILAPH THFCTICGKG FKRDANLRMH MRGHGDEYKT  300
PAALAKPNKE ASSEPVLIKR YSCPFTGCKR NKDHKKFQPL KTILCVKNHY KRTHCDKSYT  360
CSRCNTKKFS VIADLKTHEK HCGKDKWLCS CGTTFSRKDK LFGHIALFQG HTPAIPPDET  420
KGPAGPSDKG DENEVANKVG SINYSFGSGG ANGTGAQNVM DVKGGVDDPA SYFSPLNFDT  480
CNFGGFHEFP RPPFDDSESS FSFLISGLCN YSQKTGGESS SNNIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein