PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647530.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 461aa    MW: 52450.7 Da    PI: 6.7958
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS286.76.6e-88774581373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl  A+av++++l  a + L++l + +s +gd+ +R++ayf+ +L+a+l+   s  y  +  ++t    s+ee+ a++ ++ vsP+++f+h
  XP_021647530.1  77 LIHLLLITATAVDENNLGTALENLTELYQSVSLTGDSAERVVAYFADGLSAKLLTRKSPFYGMIMKEPT----SEEEFLAFTDLYRVSPYYQFAH 167
                     689****************************************************99999987777666....5788899999************ PP

            GRAS  96 ltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlv 182
                     +taNqaI ea+e+e     +++H+iDfd+s+G+QWp+L+q+L++++  ++   l+iTg g+    s eel+et++rL +f + + ++ fef+ l 
  XP_021647530.1 168 FTANQAIIEAFEKEeesnnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRILLQITGYGR----SLEELQETESRLVSFSKGFrNLVFEFQGL- 257
                     ************9988887789**********************997455569********....9****************9758*******6. PP

            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                      +  + +++   r k++E++aVnlv +l +l  e +++++    +Lk + sl+P +vv+veqe ++++ sFl rf+e+l+y++a+fdsle  lp 
  XP_021647530.1 258 LRGSKLINP---RKKKNETVAVNLVSHLNTLN-EFLKISD----TLKSIHSLNPSIVVLVEQEGSRSTRSFLSRFMESLHYFAAMFDSLEDCLPL 344
                     555666655...4589***********99995.7777777....*************************************************** PP

            GRAS 278 eseerikvErellgreivnvva...cegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkv......ksdg......yrveee.s 355
                     es+er ++E+  lg+ei++ +    c+ ++    r e++e W+ r+e+ GF+ ++ls+k   qaklll+        ++dg      +rv e+ +
  XP_021647530.1 345 ESSERLSIEKNHLGKEIKSRLNydrCNDTDsNCPRYEKMEAWKGRMESHGFSGIKLSSKSLIQAKLLLKIRthysplQFDGgsssvgFRVFERdD 439
                     ******************9986333444443678*********************************9743111111223333333377654436 PP

            GRAS 356 gslv.lgWkdrpLvsvSaW 373
                     g ++ lgW+dr L+++S+W
  XP_021647530.1 440 GRAIsLGWQDRCLLTASVW 458
                     66767************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
MMEGLEEDEL LNLSLAIVTD SGGDMKKKRK IRSFFNPLNS YEDCEGKIFR LLQIREQMLK  60
PNHKRKGVAE DGKGLHLIHL LLITATAVDE NNLGTALENL TELYQSVSLT GDSAERVVAY  120
FADGLSAKLL TRKSPFYGMI MKEPTSEEEF LAFTDLYRVS PYYQFAHFTA NQAIIEAFEK  180
EEESNNRALH VIDFDVSYGF QWPSLIQSLS EKATSGNRIL LQITGYGRSL EELQETESRL  240
VSFSKGFRNL VFEFQGLLRG SKLINPRKKK NETVAVNLVS HLNTLNEFLK ISDTLKSIHS  300
LNPSIVVLVE QEGSRSTRSF LSRFMESLHY FAAMFDSLED CLPLESSERL SIEKNHLGKE  360
IKSRLNYDRC NDTDSNCPRY EKMEAWKGRM ESHGFSGIKL SSKSLIQAKL LLKIRTHYSP  420
LQFDGGSSSV GFRVFERDDG RAISLGWQDR CLLTASVWHC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.12e-54GRAS family protein