PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647182.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 308aa    MW: 34714 Da    PI: 9.9114
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-082873346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+ E +++ +a + + ++   +W+++a++++ g+t  +++  ++ 
   XP_021647182.1 28 KWTPAENKIFENALAVYDKDtpdRWHRVAAMLP-GKTVGDVIKQYRE 73
                     8********************************.******9999986 PP
2Myb_DNA-binding48.22.6e-15135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_021647182.1 135 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MKWEMEVLSP ASYHSSTNWL IEESKSTKWT PAENKIFENA LAVYDKDTPD RWHRVAAMLP  60
GKTVGDVIKQ YRELEVDVSN IEAGLIPIPG YRTSPFTLDW ASSNTYDGFK QSYALGGKRS  120
PSGRPADQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVVTRTPT QVASHAQKYF  180
IRQLSGGKDK RRASIHDITT VNLNDVRTPS PDNKRSPPSP DQSTVLSQQS NAVAMPRTHF  240
QWNQPNSEAT MAFSATNGNM FMASPYGINS YGLKMQAHNL HRGAVHESFI APQSIAFPMQ  300
SAQHYSYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-111MYB_related family protein