PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021647092.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

RAV

Protein Properties

Length: 368aa MW: 42346.3 Da PI: 8.12

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021647092.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	28.7	3.3e-09	52	98	2	54
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 ++kGV ++g W A+I+ + +r++lg+f +++eAa a++ a+ k++ XP_021647092.1 52 KFKGVV-PQQNGHWGAQIYA------NhQRIWLGTFRSEKEAAMAYDSAAIKIR 98 789996.566899**999......44******99********9997 PP
2	B3	84.6	8.6e-27	181	280	1	83
EEEE-..-HHHHTT-EE--HHH.HTT...................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--T CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLke 76 f+k+ltpsdv+k++rlv+pkkfa ++ +g+ +++l+++d+ + W+++++y+++s+++v+t+GW++Fvk+++Lke XP_021647092.1 181 FQKELTPSDVGKLNRLVIPKKFAIKYfpyisgkmeddhdddhglgDGI--DDIELVFYDRLMKCWKFRYCYWRSSQSFVFTRGWNRFVKEKNLKE 273 99**************************988877776666654333..7899************************************* PP T-EEEEE CS B3 77 gDfvvFk 83 +D+v+F+ XP_021647092.1 274 KDIVTFY 280 ****9 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MDQDDASSSM LSNAKINPTT AETSDSSDSH YPQFRAAKRP RLEINNTITA AKFKGVVPQQ 60 NGHWGAQIYA NHQRIWLGTF RSEKEAAMAY DSAAIKIRSG DSHRNFPWTE RNIQEPNFQS 120 QYSTEAILNM IKDGSYQPKF ADFLRTQSRR QEAAAGKSLN NNSNQTRAYG GDGQFSCIQL 180 FQKELTPSDV GKLNRLVIPK KFAIKYFPYI SGKMEDDHDD DHGLGDGIDD IELVFYDRLM 240 KCWKFRYCYW RSSQSFVFTR GWNRFVKEKN LKEKDIVTFY ACVCPERVQE GQHFSLIDIS 300 YSNGQSCSVV DGPYQIEDMQ EELELNLGQT IRNKLQKDHH QGKENRFRGS EFNNAKEKGL 360 RLFGVQIN

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MDQDDASSSM LSNAKINPTT AETSDSSDSH YPQFRAAKRP RLEINNTITA AKFKGVVPQQ  60
NGHWGAQIYA NHQRIWLGTF RSEKEAAMAY DSAAIKIRSG DSHRNFPWTE RNIQEPNFQS  120
QYSTEAILNM IKDGSYQPKF ADFLRTQSRR QEAAAGKSLN NNSNQTRAYG GDGQFSCIQL  180
FQKELTPSDV GKLNRLVIPK KFAIKYFPYI SGKMEDDHDD DHGLGDGIDD IELVFYDRLM  240
KCWKFRYCYW RSSQSFVFTR GWNRFVKEKN LKEKDIVTFY ACVCPERVQE GQHFSLIDIS  300
YSNGQSCSVV DGPYQIEDMQ EELELNLGQT IRNKLQKDHH QGKENRFRGS EFNNAKEKGL  360
RLFGVQIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	1e-107	RAV family protein