PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021647083.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 324aa MW: 36608 Da PI: 8.4556 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.8 | 4e-18 | 111 | 209 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f +lt sd +++g l++ ++ ae++ ++++ + l +d++g+ W++k+ +r++++r++lt+GWk F+++++L gD++ F + + XP_021647083.1 111 FHRTLTASDISNHGSLYINRHDAENClpplelsEEVPYQ--YLDATDLQGNNWRFKHVFRGTPKRHLLTEGWKAFASSKKLAKGDVLNFL--RGE 201 77899******************999****766555445..69999*******************************************9..347 PP EE..EEEE CS B3 89 efelvvkv 96 ++ l+v++ XP_021647083.1 202 TGPLLVGL 209 88778775 PP | |||||||
2 | Auxin_resp | 76.5 | 7.1e-26 | 239 | 318 | 3 | 83 |
Auxin_resp 3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a++ +++F+ +Y+Pr +seF+v+v+k+++a + ++ +G+ f m++e+e++ e+r++G +vg +d ++W +S+Wrs+k XP_021647083.1 239 MAIKIGTPFHFIYKPRENKSEFMVNVNKYLEAQNLNFPIGTSFSMRLEGEEVLEQRFTGHIVGSQDN-VSSWAGSEWRSIK 318 688999************************************************************5.55********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MDYSTVARPH ANYGDALKKK ILDICAGGTL PCRGEQFYYF PEGHIEKLGG PMVRGLELPF 60 ELPSKILCEV MNVYHMAEPE TDQISVEITL VHVKNQRKVT SPNPQLLVHS FHRTLTASDI 120 SNHGSLYINR HDAENCLPPL ELSEEVPYQY LDATDLQGNN WRFKHVFRGT PKRHLLTEGW 180 KAFASSKKLA KGDVLNFLRG ETGPLLVGLK KLMKQDTNGT PSIKSLKDKC VGTLSSAFMA 240 IKIGTPFHFI YKPRENKSEF MVNVNKYLEA QNLNFPIGTS FSMRLEGEEV LEQRFTGHIV 300 GSQDNVSSWA GSEWRSIKVH VYLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 1e-103 | ARF family protein |