PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021647058.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 448aa    MW: 51224.4 Da    PI: 8.9933
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021647058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.42.2e-1716105399
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     k+   +++ ++g l++p kf++ +g+    s  ++l+d++g sW+v+l   k+ ++++l+kGW eF + + Lk g  v+F+++++s f  +v vf
  XP_021647058.1  16 KII-LENTIREGKLRIPSKFLKYYGNC--LSSPIILKDPTGTSWKVEL--LKNVNEVWLEKGWPEFSENHTLKHGHLVLFQYQRDSHF--HVFVF 103
                     444.356677888********777654..5557***************..9*******************************999999..88887 PP

                     -S CS
              B3  98 rk 99 
                     ++
  XP_021647058.1 104 DE 105
                     75 PP
2B345.71.2e-141972781298
                     HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     +++++++p + ++eh++   es+  ++     +sW vkl++  +++  +l++GW  F+++n L++gD+++++l++r+    +v +fr
  XP_021647058.1 197 QHHNVRVPISLIREHMEC--ESQ-TMMLKVAEKSWPVKLNVYLNRKLAMLSGGWPAFARENSLEAGDVCILELIERNVL--NVNIFR 278
                     467799999******754..343.45556699*******665555559*************************986666..888876 PP
3B343.84.5e-143654421698
                     EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      ++p  f++++++ +    + +l     +sW vkl  + + ++   +l++GW  F+++n L +gD+++F+l++r+    +v++fr
  XP_021647058.1 365 ARVPVGFIKRYMECE---SQTMLLKVAEKSWPVKL--NVYLDKhlAILSGGWPAFARENSLGAGDVCIFELIERNVL--NVHIFR 442
                     578999**9997443...3577788899*******..6655555589************************986666..999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MTPPSSVTRK PSCFFKIILE NTIREGKLRI PSKFLKYYGN CLSSPIILKD PTGTSWKVEL  60
LKNVNEVWLE KGWPEFSENH TLKHGHLVLF QYQRDSHFHV FVFDESAVET EYSSSGLHSG  120
TPNFNGESPQ PNKQEVDDQD DIFCGNHSKG KRKRFKDEKG ISRQARRPKC SKTCGAHEAA  180
DRDFISSYPY FKVVLRQHHN VRVPISLIRE HMECESQTMM LKVAEKSWPV KLNVYLNRKL  240
AMLSGGWPAF ARENSLEAGD VCILELIERN VLNVNIFRCA PNFGGESPQP KKKETDDQDD  300
ISCDDPTRNG NQSKGKRKQF KDEKGISRQA GWPKCSKTCG AHEADNSFIS SYPYFKVVLR  360
QLQNARVPVG FIKRYMECES QTMLLKVAEK SWPVKLNVYL DKHLAILSGG WPAFARENSL  420
GAGDVCIFEL IERNVLNVHI FRYAKLND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-32B3 family protein