PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646899.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 497aa MW: 52306.9 Da PI: 8.8163

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_021646899.1 67 FVCEICNKGFQRDQNLQLHRRGH 89 89*******************88 PP
2	zf-C2H2	15.8	4.1e-05	143	165	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_021646899.1 143 WKCERCSKKYAVQSDWKAHMKTC 165 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MVEVENSSQM TISIASGEAT SVSSFGNQEA LPSVPPPKKK RNLPGTPDPD AEVVALSPKT 60 LLTANRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRTT KEPRKRVYVC PEPTCVHHNP 120 ARALGDLTGI KKHFCRKHGE KKWKCERCSK KYAVQSDWKA HMKTCGTREY KCDCGTLFSR 180 RDSFITHRAF CDALAEESAR ARTLTILGKE GNTNVKSVVA SPSPPPLTPS TTVVSPGLSS 240 VQSSELTENP VGLSAATPAT TCLTATVTST SSTSSISNVF ASVFASSSIA AAISQAASHA 300 SSALFPSLFC ALTHSDYPTT IPTPRAIEPP SLSLSSSLYL SSNASSLFPD QDHRHYTPPQ 360 LPMSATALLQ KAAQMGATSS NSSFLHGLGL PVSSSSGQDI NGNQRDVKPD TNIVASGLGL 420 GLPSGDVMMG ASPLFGNKPT TLDLLGLGIG AGSAFLNSYG GSFNVGAAAS APYGGGGSPE 480 ETWDAAAEKK SNGSASH

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MVEVENSSQM TISIASGEAT SVSSFGNQEA LPSVPPPKKK RNLPGTPDPD AEVVALSPKT  60
LLTANRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRTT KEPRKRVYVC PEPTCVHHNP  120
ARALGDLTGI KKHFCRKHGE KKWKCERCSK KYAVQSDWKA HMKTCGTREY KCDCGTLFSR  180
RDSFITHRAF CDALAEESAR ARTLTILGKE GNTNVKSVVA SPSPPPLTPS TTVVSPGLSS  240
VQSSELTENP VGLSAATPAT TCLTATVTST SSTSSISNVF ASVFASSSIA AAISQAASHA  300
SSALFPSLFC ALTHSDYPTT IPTPRAIEPP SLSLSSSLYL SSNASSLFPD QDHRHYTPPQ  360
LPMSATALLQ KAAQMGATSS NSSFLHGLGL PVSSSSGQDI NGNQRDVKPD TNIVASGLGL  420
GLPSGDVMMG ASPLFGNKPT TLDLLGLGIG AGSAFLNSYG GSFNVGAAAS APYGGGGSPE  480
ETWDAAAEKK SNGSASH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-114	C2H2 family protein