PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646294.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SRS

Protein Properties

Length: 343aa MW: 36550.7 Da PI: 7.1855

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	231.7	1.2e-71	102	253	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelkskkqsalsstklssaes 96 g++sCqdCGnqa+kdC+++RCRtCCksrgfdC+thvkstWvpa+krrerqqq +a+++++++ + + +++kr re+ +++s+l++t+l+++ s XP_021646294.1 102 GGGMSCQDCGNQARKDCVYMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQRSALQQQQQHLQlSGENPKRLREN-PSSSSSLACTRLPTNAS 195 5789***********************************************999988887766477777888875.9999********* PP DUF702 97 kkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le ++P+evss+avfrcvrvs++d+ ++++aYqtav+igGh fkGiLyd+G+e+ XP_021646294.1 196 VLGLELGNFPAEVSSPAVFRCVRVSGIDEHDDQYAYQTAVNIGGHFFKGILYDHGPES 253 ******************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAGLFSLGGG GGGSNQDDQH NNPPSEIPQE GWFWYKNEDI PCKGFELWQQ QEFLHQRHQN 60 PQQDLYSSAA GLGVGPGRSS INFSDESSSR SAFMMMRSSS GGGGMSCQDC GNQARKDCVY 120 MRCRTCCKSR GFDCQTHVKS TWVPASKRRE RQQQRSALQQ QQQHLQLSGE NPKRLRENPS 180 SSSSLACTRL PTNASVLGLE LGNFPAEVSS PAVFRCVRVS GIDEHDDQYA YQTAVNIGGH 240 FFKGILYDHG PESTYMSAAE TSSGGASGVA QPLNLITAGT ATASAAISPT GAGGGVTSAS 300 SSAAASAFMD PSSLYPIPLN TFIAVHIGLG KLPFPCLPVS LPV

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAGLFSLGGG GGGSNQDDQH NNPPSEIPQE GWFWYKNEDI PCKGFELWQQ QEFLHQRHQN  60
PQQDLYSSAA GLGVGPGRSS INFSDESSSR SAFMMMRSSS GGGGMSCQDC GNQARKDCVY  120
MRCRTCCKSR GFDCQTHVKS TWVPASKRRE RQQQRSALQQ QQQHLQLSGE NPKRLRENPS  180
SSSSLACTRL PTNASVLGLE LGNFPAEVSS PAVFRCVRVS GIDEHDDQYA YQTAVNIGGH  240
FFKGILYDHG PESTYMSAAE TSSGGASGVA QPLNLITAGT ATASAAISPT GAGGGVTSAS  300
SSAAASAFMD PSSLYPIPLN TFIAVHIGLG KLPFPCLPVS LPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	1e-72	SRS family protein