PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646168.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YA

Protein Properties

Length: 331aa MW: 36409.3 Da PI: 9.6641

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	89.7	3.8e-28	162	219	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRaklee.ekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p++VN+KQy++I++RR++Rak+ e+k +k+rkpy+h SRh hA+rRpRg+gGrF XP_021646168.1 162 DGPIFVNPKQYHGIIRRRKTRAKAVLlENKS-TKKRKPYMHLSRHLHAMRRPRGTGGRF 219 57*******************99856666.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MAVKTLYFKE HEGIVHNPIG QLSSVPSMPW WNTFGSQSSY GESCALFKPS LMEQPPICED 60 SLTAMKQARL GIEQGLVKGN MTQFTIFPGN CKTSGDGQKS PQTAISLQTS LPEYRAHIDQ 120 GYGQPMIYAK YPHVDQCYGL FSSYGPQILG RIMLPMNMTT DDGPIFVNPK QYHGIIRRRK 180 TRAKAVLLEN KSTKKRKPYM HLSRHLHAMR RPRGTGGRFL NTKTSDNGIG EIEAKKDGGV 240 KISQPTGSQS SEVLQSDSGT LNSSKEANGG GSNLSGSEVT STYTRRDLDH FSINHLASPV 300 QSFSVMMDSG HNNVMPSKWV AAADNCCNLK V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	196	RRRKTRAKAVLLENKSTKKR
2	177	197	RRRKTRAKAVLLENKSTKKRK
3	178	197	RRRKTRAKAVLLENKSTKKR
4	178	198	RRRKTRAKAVLLENKSTKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06510.2	6e-73	NF-YA family protein