PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021646167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YA | ||||||||
Protein Properties | Length: 331aa MW: 36409.3 Da PI: 9.6641 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 89.7 | 3.8e-28 | 162 | 219 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRaklee.ekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p++VN+KQy++I++RR++Rak+ e+k +k+rkpy+h SRh hA+rRpRg+gGrF XP_021646167.1 162 DGPIFVNPKQYHGIIRRRKTRAKAVLlENKS-TKKRKPYMHLSRHLHAMRRPRGTGGRF 219 57*********************99856666.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MAVKTLYFKE HEGIVHNPIG QLSSVPSMPW WNTFGSQSSY GESCALFKPS LMEQPPICED 60 SLTAMKQARL GIEQGLVKGN MTQFTIFPGN CKTSGDGQKS PQTAISLQTS LPEYRAHIDQ 120 GYGQPMIYAK YPHVDQCYGL FSSYGPQILG RIMLPMNMTT DDGPIFVNPK QYHGIIRRRK 180 TRAKAVLLEN KSTKKRKPYM HLSRHLHAMR RPRGTGGRFL NTKTSDNGIG EIEAKKDGGV 240 KISQPTGSQS SEVLQSDSGT LNSSKEANGG GSNLSGSEVT STYTRRDLDH FSINHLASPV 300 QSFSVMMDSG HNNVMPSKWV AAADNCCNLK V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 177 | 196 | RRRKTRAKAVLLENKSTKKR |
2 | 177 | 197 | RRRKTRAKAVLLENKSTKKRK |
3 | 178 | 197 | RRRKTRAKAVLLENKSTKKR |
4 | 178 | 198 | RRRKTRAKAVLLENKSTKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.2 | 6e-73 | NF-YA family protein |