PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021646073.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CO-like

Protein Properties

Length: 498aa MW: 54687.7 Da PI: 5.9867

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021646073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.2	2.5e-06	11	43	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 C+ ++++ + l+C+ ++ lC C ++ H+ XP_021646073.1 11 SVPCDFCSDQVAVLYCRADSAKLCLFCDQHVHS 43 678**************************9995 PP
2	zf-B_box	25	4e-08	54	98	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+++ +++++ C +++ lC++C + H + H+++p XP_021646073.1 54 SQICDNCTSEPVSVRCATDNLVLCQECDFDAHGScfvsvsHDRTP 98 579*****************************5599999998877 PP
3	CCT	63.7	5.7e-22	450	493	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a++RYkeK+ktR+++++irYesRKa+A+sR+RvKGrFvk++ XP_021646073.1 450 RGTAMQRYKEKKKTRRYDNHIRYESRKARADSRKRVKGRFVKAS 493 6789**************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MESPKSETKQ SVPCDFCSDQ VAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC 60 TSEPVSVRCA TDNLVLCQEC DFDAHGSCFV SVSHDRTPVE GFTGCPSALE LALIWGFDLE 120 EKKLDEPSAP LIESWSDGGV LDMVMQMEPW MCRSNAGVSY QDLMVPNDKA TAYGNVCNFE 180 MVTMPKSQQS PSCGKYKQVI YKQLVGLLKR NLMTGDIGGG GDNLMPETPS RSGWQGNEEV 240 ADFGNANDGI IAANVAGSTV PQQPLQEQPP FTSLCMLPSQ MDLKPSGRVA GENIMWDGNA 300 SAQGTQIWDF HLGQLRTHEE SDHLEVAYGS SDAGFVIKNI GELMKETSFS NAKMFVDMYQ 360 LDCPIAHDDM ALFNNKSNNP TASQGPATSE SNDLPRARPL SGSTFGKLKS SSGGKDIQFI 420 DMGHKILVRG DSMSTPPATK ADIELLAKNR GTAMQRYKEK KKTRRYDNHI RYESRKARAD 480 SRKRVKGRFV KASDAPDG

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MESPKSETKQ SVPCDFCSDQ VAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC  60
TSEPVSVRCA TDNLVLCQEC DFDAHGSCFV SVSHDRTPVE GFTGCPSALE LALIWGFDLE  120
EKKLDEPSAP LIESWSDGGV LDMVMQMEPW MCRSNAGVSY QDLMVPNDKA TAYGNVCNFE  180
MVTMPKSQQS PSCGKYKQVI YKQLVGLLKR NLMTGDIGGG GDNLMPETPS RSGWQGNEEV  240
ADFGNANDGI IAANVAGSTV PQQPLQEQPP FTSLCMLPSQ MDLKPSGRVA GENIMWDGNA  300
SAQGTQIWDF HLGQLRTHEE SDHLEVAYGS SDAGFVIKNI GELMKETSFS NAKMFVDMYQ  360
LDCPIAHDDM ALFNNKSNNP TASQGPATSE SNDLPRARPL SGSTFGKLKS SSGGKDIQFI  420
DMGHKILVRG DSMSTPPATK ADIELLAKNR GTAMQRYKEK KKTRRYDNHI RYESRKARAD  480
SRKRVKGRFV KASDAPDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.2	1e-109	CO-like family protein