PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021645503.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family NF-YA
Protein Properties Length: 341aa    MW: 36871.8 Da    PI: 9.8441
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021645503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.61.5e-31167223158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQ+++Il+RRq+Rak+e ekk   k +kpylheSRhkhA+rR+Rg+gGrF
  XP_021645503.1 167 EEPVYVNAKQFHGILRRRQARAKAELEKKA-VKVKKPYLHESRHKHAMRRARGCGGRF 223
                     69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MPAKPENGNH RLDKSAQSVL QSAICSQPWW QGVGNGTTFG ESSSKSSSVE HLSGSLADGA  60
IQSQANSGLE SGASSNKDTQ ITTASQSDGS NGQERHLKQV PMSAPVAMGG YLEPTSQMEL  120
VGHSIVLTSY PYLDPQYGRI LSYAPQAMVP PQFLHHARMP LPLEMEEEPV YVNAKQFHGI  180
LRRRQARAKA ELEKKAVKVK KPYLHESRHK HAMRRARGCG GRFLSTKKPE NNSTDPMADK  240
DVNSGANPSR QSTTFSGSEW LSKNNTRDLD FSSGQQEGKG YTGQDMQAHT SSNGNGSGNG  300
HGLSSIYHPS SGDVLTGGFL GRQREKSTHR NGVTNGALRI N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208217RHKHAMRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.21e-22NF-YA family protein