PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021645350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27555.5 Da PI: 9.5815 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87 | 1e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v+ifsstgkly++ss XP_021645350.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 85.5 | 1.1e-28 | 77 | 170 | 5 | 98 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ + ++ + +q+e+a L+++++nLq+++R+++Ge+L+ Ls+keLq+Le++Le sl+ +R k++++l+++i+el +k + l++en +L kk+ XP_021645350.1 77 QQMGNPISEVKFWQREAAMLRQQLQNLQENHRQMMGEELSGLSVKELQNLESRLEMSLRGVRMKRDQILMDEIQELNRKGNFLHQENVELCKKI 170 4444677889********************************************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MGRGKIAIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVVIFSS TGKLYDFSST 60 SMKSVIERYN KSKEEHQQMG NPISEVKFWQ REAAMLRQQL QNLQENHRQM MGEELSGLSV 120 KELQNLESRL EMSLRGVRMK RDQILMDEIQ ELNRKGNFLH QENVELCKKI YGAGNINGVN 180 RDYFSTNSLG IEEESNVPVH LQLSQPQQQN YDTPARATKL GYNSLHITSI LIMLMPTSCS 240 T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 1e-105 | MIKC_MADS family protein |