PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021645099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 185aa MW: 21191.8 Da PI: 9.4887 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 54.7 | 3.4e-17 | 131 | 172 | 1 | 43 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSR 43 +ep++VNaKQy++Il+RRq+Rak+e+e+k+ +ksrk SR XP_021645099.1 131 EEPVFVNAKQYHGILRRRQSRAKAESENKV-IKSRKVHFDLSR 172 69****************************.9***98887777 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 185 aa Download sequence |
MIFQIVVQII VRRMSSRNTQ NLRFCLHLLQ LHWCTLGCRT QMFSMQQVCN LVQGTQCWAL 60 SRTNFHAWLV ELKAAAAAAA YPYSDPYYRS IFAPYDAQPY PPQPYGGQPM VHLQLMGIQQ 120 AGVPLPSEAV EEPVFVNAKQ YHGILRRRQS RAKAESENKV IKSRKVHFDL SRANICCSFL 180 MLCLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G30500.2 | 3e-37 | NF-YA family protein |