PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021645087.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YA | ||||||||
Protein Properties | Length: 223aa MW: 25417 Da PI: 10.2604 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 100.8 | 1.3e-31 | 127 | 183 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+e+k+ +ksrk ylheSRh hAlrR+Rg gGrF XP_021645087.1 127 EEPVFVNAKQYHGILRRRQSRAKAESENKV-IKSRKSYLHESRHLHALRRARGLGGRF 183 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MIFQIIVRRM SSRNTQNLRF CLHLLQLHWC TLGCRTQMFS MQQVCNLVQG TQCWALSRTN 60 FHAWLVELKA AAAAAAYPYS DPYYRSIFAP YDAQPYPPQP YGGQPMVHLQ LMGIQQAGVP 120 LPSEAVEEPV FVNAKQYHGI LRRRQSRAKA ESENKVIKSR KSYLHESRHL HALRRARGLG 180 GRFLNSKKNG NQQEKEDSPS DKSQSNINLN SNKNDIALSD SKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 3e-43 | NF-YA family protein |