PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021644877.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 480aa    MW: 54098.7 Da    PI: 6.0689
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021644877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4748e-145564771374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+cA++v++g+le+a+ +L ++s+las dgd+mqR+aayfteALa+r+ +s +++y+al++++ +   +see+ ++klf+e+ P+lk+++
  XP_021644877.1  56 LIHLLLTCANHVAAGNLENAEIALGQISQLASADGDTMQRIAAYFTEALAHRVIKSLPGVYRALNATKIT--LVSEEILVRKLFFEMLPFLKVAF 148
                     689*************************************************************999998..7********************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +++NqaI ea+ege++vHiiD+d+ +++QW+aLlqaL++Rpegpp+lRiTg+++    +ke l +++++L + Ae+l++pf+fn+ ++++le+l+
  XP_021644877.1 149 VLTNQAIIEAMEGEKMVHIIDLDAAEPAQWLALLQALSARPEGPPHLRITGIHQ----QKEVLDQMAHKLIEEAERLDIPFQFNP-IVSKLENLD 238
                     ******************************************************....9**************************.7999***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll.........................................................desvsleserdevL 228
                     +e+Lrvk+gEala+++vlqlh +l                                                         ++++s+  + d +L
  XP_021644877.1 239 IEKLRVKTGEALAICSVLQLHPFLasddelrkrspvplknsngihllrvlqmnqgtfgellekdmvngyspspdstsssplSSTASV--KMDYFL 331
                     ***************************************************************************987654333333..4699** PP

            GRAS 229 klvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaG 323
                     ++++slsPk++vv+eq+++hn+++++er+leal+ y+alfd+le++++r+s er k+E++l+g+ei+n+vacegaer+erhe+lekW +rl+ aG
  XP_021644877.1 332 NMLWSLSPKLMVVMEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSMERLKMEKMLFGEEIKNIVACEGAERKERHEKLEKWIQRLDLAG 426
                     *********************************************************************************************** PP

            GRAS 324 FkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     F+ v+ls++ + qa++ll+ ++ dgyr++ee+g +v++W+drpL+svSaWr
  XP_021644877.1 427 FGLVHLSYYGMLQARRLLQGYGCDGYRIKEENGYVVICWQDRPLFSVSAWR 477
                     **************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MWVFDQLQNP LLCTIGSSPV TSSPFHFSPI MSLSTGIESP YPWLGELKSE ERGLYLIHLL  60
LTCANHVAAG NLENAEIALG QISQLASADG DTMQRIAAYF TEALAHRVIK SLPGVYRALN  120
ATKITLVSEE ILVRKLFFEM LPFLKVAFVL TNQAIIEAME GEKMVHIIDL DAAEPAQWLA  180
LLQALSARPE GPPHLRITGI HQQKEVLDQM AHKLIEEAER LDIPFQFNPI VSKLENLDIE  240
KLRVKTGEAL AICSVLQLHP FLASDDELRK RSPVPLKNSN GIHLLRVLQM NQGTFGELLE  300
KDMVNGYSPS PDSTSSSPLS STASVKMDYF LNMLWSLSPK LMVVMEQDSN HNGSTLMERL  360
LEALYSYAAL FDCLESTVSR TSMERLKMEK MLFGEEIKNI VACEGAERKE RHEKLEKWIQ  420
RLDLAGFGLV HLSYYGMLQA RRLLQGYGCD GYRIKEENGY VVICWQDRPL FSVSAWRCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein