PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644836.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

RAV

Protein Properties

Length: 353aa MW: 40917.3 Da PI: 8.9496

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30	1.3e-09	32	78	2	54
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 ++kGV ++g W A+I+ + +r++lg+f +++eAa a++ a+ k++ XP_021644836.1 32 KFKGVV-PQQNGHWGAQIYA------NhQRIWLGTFKSEKEAAMAYDSAAIKIR 78 789996.566899**999......44******99********9987 PP
2	B3	84.5	9.5e-27	160	256	1	83
EEEE-..-HHHHTT-EE--HHH.HTT................---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh................ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 f+k+ltpsdv+k++rlv+pkkfa ++ g++ +++l+l+d+ + W+++++y+++s+++v+t+GW++Fvk+++Lke+D+ XP_021644836.1 160 FQKELTPSDVGKLNRLVIPKKFAVKYfpyisgnvevddnrirGEI--DDTELVLYDRLLKCWKFRYCYWRSSQSFVFTRGWNRFVKEKNLKEKDI 252 99**************************988777776664323..6789**************************************** PP EEEE CS B3 80 vvFk 83 v+F+ XP_021644836.1 253 VIFY 256 *9 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MAVNQIQRDS FDSHAAKRPR LELNNDIIIA AKFKGVVPQQ NGHWGAQIYA NHQRIWLGTF 60 KSEKEAAMAY DSAAIKIRSV DSHRNFPWTE RNIQEPDFQS QYSTEAILNM IRDGSYQPKF 120 ADFLRKQSRR QEAAATGTSL NNQTRVHGID DGQFSCIQLF QKELTPSDVG KLNRLVIPKK 180 FAVKYFPYIS GNVEVDDNRI RGEIDDTELV LYDRLLKCWK FRYCYWRSSQ SFVFTRGWNR 240 FVKEKNLKEK DIVIFYACVC PERVHQEALN FCLIDISYSN GQSCSVVDDG AYQIEDMQKE 300 LELNLGLTIR NKLQKDHHHP GKESKEENRL RGLELNNSTT KGKGFKLFGT RID

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MAVNQIQRDS FDSHAAKRPR LELNNDIIIA AKFKGVVPQQ NGHWGAQIYA NHQRIWLGTF  60
KSEKEAAMAY DSAAIKIRSV DSHRNFPWTE RNIQEPDFQS QYSTEAILNM IRDGSYQPKF  120
ADFLRKQSRR QEAAATGTSL NNQTRVHGID DGQFSCIQLF QKELTPSDVG KLNRLVIPKK  180
FAVKYFPYIS GNVEVDDNRI RGEIDDTELV LYDRLLKCWK FRYCYWRSSQ SFVFTRGWNR  240
FVKEKNLKEK DIVIFYACVC PERVHQEALN FCLIDISYSN GQSCSVVDDG AYQIEDMQKE  300
LELNLGLTIR NKLQKDHHHP GKESKEENRL RGLELNNSTT KGKGFKLFGT RID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G50680.1	1e-113	RAV family protein