PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644388.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 979aa MW: 109617 Da PI: 7.7108

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644388.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.5	8.3e-09	208	263	16	71
trihelix 16 emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 e+ ++ rgk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e+++ XP_021644388.1 208 EVTVQSTRGKTRADKDREVAEFLQRHGVNRDAKTAGTKWDNMLGEFRKVFEWERDQ 263 666677788999*****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 979 aa Download sequence
MGENTGETAK QQTQQSQQQH LPSSPKDPLE ETPETRPHHH QQPPSVVATG APFISTPLYV 60 PIGATSSAYD QQFETVTPKR PRYATAQWKI LPSPPQQQQT QKQMATIVTR ESSPSPSTNP 120 PPTTNPQTQQ LHSTAASSSD TASSPPHSPL PYLPAASGQE TSKTEGQQLH HQFRKGKYVS 180 PIWKPNEMLW LARAWRVQYQ DIGQTTGEVT VQSTRGKTRA DKDREVAEFL QRHGVNRDAK 240 TAGTKWDNML GEFRKVFEWE RDQVGKSYFR LSSHERKQHK LPASFDEEVF EELSQFMGSR 300 MRTSSRAAIG SGDDGRTALA GVRALPPPPP FKDDDYSNAT LSSVAGRTKQ VMTSGGEAYF 360 HGSRGSLLGF ESSMDVAATG ASSSSKELRR IGKIRMTWEE SVSLWAEEGA HRGRVRVQGS 420 SFLNADELTF FDDSMVACTM EAFERGPLKG FSVDRFVSGQ QVKVFGRRKS SSSASASSSV 480 FISGFVERFQ LPSVEPAIRS IPAWEFQDPT EYYVGCLRVP PTALPNLFEL SWYLQEPPPE 540 ELRFPLRRDV YRDLPPGKEH FFTTATELLD CRGIAFDILS SVIRTNPSIS GANAASRDSF 600 IGIWDDCINR VVSKFCSVEV VIVRKAPSSS SVNTLQDQWP NVTGFVRNFC LWRGEESDQL 660 REGQADPSSS IVEKLLWTYM DIPYILGYYA VGYSVTFCAL YRSQDRIIRT DLCAVDLSSP 720 VERLRALVPC YRIAGLLPLL AERCFNNINN GGTFKQLTFS DFERVDVGDG SIIEMTPNTV 780 TRFFPSKRKW AAVKEIYDYL DQRIPHAEFI FRTLEKDLAL VFKPRGVKFK PTNCEQLVEA 840 LKYVTKALVA LHDLSFMHRD LSWDKVMRRS DRENEWFVCG FDEAVGAPQL YPHGVVEAHG 900 RHAPEMGRGL HGVKVDVWGV GYLVKTCGLG PDGVPKMLRE LQNRCLDKNP EQRPTAADCY 960 HHLLQVQSSL QSSSSGGPY

Sequence ? help Back to Top

Protein Sequence Length: 979 aa Download sequence

MGENTGETAK QQTQQSQQQH LPSSPKDPLE ETPETRPHHH QQPPSVVATG APFISTPLYV  60
PIGATSSAYD QQFETVTPKR PRYATAQWKI LPSPPQQQQT QKQMATIVTR ESSPSPSTNP  120
PPTTNPQTQQ LHSTAASSSD TASSPPHSPL PYLPAASGQE TSKTEGQQLH HQFRKGKYVS  180
PIWKPNEMLW LARAWRVQYQ DIGQTTGEVT VQSTRGKTRA DKDREVAEFL QRHGVNRDAK  240
TAGTKWDNML GEFRKVFEWE RDQVGKSYFR LSSHERKQHK LPASFDEEVF EELSQFMGSR  300
MRTSSRAAIG SGDDGRTALA GVRALPPPPP FKDDDYSNAT LSSVAGRTKQ VMTSGGEAYF  360
HGSRGSLLGF ESSMDVAATG ASSSSKELRR IGKIRMTWEE SVSLWAEEGA HRGRVRVQGS  420
SFLNADELTF FDDSMVACTM EAFERGPLKG FSVDRFVSGQ QVKVFGRRKS SSSASASSSV  480
FISGFVERFQ LPSVEPAIRS IPAWEFQDPT EYYVGCLRVP PTALPNLFEL SWYLQEPPPE  540
ELRFPLRRDV YRDLPPGKEH FFTTATELLD CRGIAFDILS SVIRTNPSIS GANAASRDSF  600
IGIWDDCINR VVSKFCSVEV VIVRKAPSSS SVNTLQDQWP NVTGFVRNFC LWRGEESDQL  660
REGQADPSSS IVEKLLWTYM DIPYILGYYA VGYSVTFCAL YRSQDRIIRT DLCAVDLSSP  720
VERLRALVPC YRIAGLLPLL AERCFNNINN GGTFKQLTFS DFERVDVGDG SIIEMTPNTV  780
TRFFPSKRKW AAVKEIYDYL DQRIPHAEFI FRTLEKDLAL VFKPRGVKFK PTNCEQLVEA  840
LKYVTKALVA LHDLSFMHRD LSWDKVMRRS DRENEWFVCG FDEAVGAPQL YPHGVVEAHG  900
RHAPEMGRGL HGVKVDVWGV GYLVKTCGLG PDGVPKMLRE LQNRCLDKNP EQRPTAADCY  960
HHLLQVQSSL QSSSSGGPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	7e-09	Trihelix family protein