PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021644301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 189aa MW: 21747.4 Da PI: 10.3175 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.5 | 7.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks r vtfskRrng++KKA ELSvLCd+e+ viifss+gklye++s XP_021644301.1 9 KRIEDKSSRLVTFSKRRNGLIKKARELSVLCDVEIGVIIFSSSGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 44.7 | 5.7e-16 | 90 | 156 | 32 | 99 |
K-box 32 qreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e R+l G + e Lsl +L +Le++ + +l++ R++K+el+le+i+ l kke +l+een L++++e XP_021644301.1 90 MIE-RQLEGPNREHLSLTDLIKLENHFDAALTQTRARKTELMLESIKVLHKKEIMLKEENGLLEREIE 156 444.9************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MGRKKVEMKR IEDKSSRLVT FSKRRNGLIK KARELSVLCD VEIGVIIFSS SGKLYEFCSN 60 GSSYDSVWTR FSKNTRGILK GKLLLSKVLM IERQLEGPNR EHLSLTDLIK LENHFDAALT 120 QTRARKTELM LESIKVLHKK EIMLKEENGL LEREIEAIEN DVGMMKRLRS PQNLHLVHAS 180 EQTTLSLLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65050.2 | 1e-40 | MIKC_MADS family protein |