PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021644268.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 983aa MW: 110413 Da PI: 5.1535

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021644268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.6	3.1e-55	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n++k++lt+e++++p+ gsl+L+n++++r+frkDG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+n++fqr XP_021644268.1 13 QEaQRRWLKPAEVLYILQNHDKYQLTQEPPQKPTGGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNSNFQR 107 56599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r++w+L+ ++e+ivlvhy+e XP_021644268.1 108 RSFWMLDPAYEHIVLVHYRE 127 ****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
MSQSGYDINV LFQEAQRRWL KPAEVLYILQ NHDKYQLTQE PPQKPTGGSL FLFNKRVLRF 60 FRKDGHNWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNSNFQRRSF WMLDPAYEHI 120 VLVHYREIGE GKSTTGPAAQ LSPAFSSSFS PSPTSYTTQN QDSTSAISDL YDPYRNSSSP 180 SSIEVSSEIV TKDNGLDTTT EFTSSTKVEV SQYLRRLEEQ LSLNEDNIKE IDPLCNEEGV 240 TNDPELFEFE KEISKKDNSA NVPHRLEYVV NNQCYDGHDG MQLQTNNLVH LQNAGDGGEY 300 HQPYVRKYAD GSKESVSWNE VLESCEASSG LEYEEKPQPY LREPAEEHEY SGWLNFDEIN 360 VRNSSVLLPQ EVENFEIPAY SSVMGTHETN PDYYSMLYDQ GQLGVPIEAD SSLTIARQQK 420 FTIREISPEW GFTSEATKVI VVGSFLCDPS ESAWTCMFGD TEVPIEIIQE GVLRCEAPPH 480 LPGKVTCCIT SGNRESCSEI REFEYRAKSS FPHCNSSQME VAESPEELLL LVRFVQMLLS 540 DSSLQKEDSI ETGIQLLRKL KTDDDSWGSI IGALLVGNGT STGTVDWLLQ QLLKDKLQQW 600 LSSKSQERQD QPNCNLSKKE QGIIHMVAGL GYEWALSAIL SHRVSIDFRD INGWTALHWA 660 ARFGREKMVA ALIASGASAG AVTDPTSRDP IGKTPASIAA SSGHKGLAGY LSEVALTSHL 720 SSLTLEESEL SKGSAEAEAE RTVDAISKGN FAANEDQASL KDTLAAVRNA AQAAARIQSA 780 FRAHSFRKRQ EREALTSTNS IDEYGVISGD IQGLSAMSKL AFRNARDYNL AALSIQKKYR 840 GWKGRKDFLA FRQKVVKIQA HVRGYQVRKH YKVICWAVGI LDKVVLRWRR KGAGLRGFRN 900 DVEPIDESED EDILKVFRKQ KVDGAIDESV SRVLSMVDSP EARQQYQRML ERYRQAKAEL 960 GETSEAAATS LDDMENDDMY HFQ

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

MSQSGYDINV LFQEAQRRWL KPAEVLYILQ NHDKYQLTQE PPQKPTGGSL FLFNKRVLRF  60
FRKDGHNWRK KKDGRTVGEA HERLKVGNVE ALNCYYAHGE QNSNFQRRSF WMLDPAYEHI  120
VLVHYREIGE GKSTTGPAAQ LSPAFSSSFS PSPTSYTTQN QDSTSAISDL YDPYRNSSSP  180
SSIEVSSEIV TKDNGLDTTT EFTSSTKVEV SQYLRRLEEQ LSLNEDNIKE IDPLCNEEGV  240
TNDPELFEFE KEISKKDNSA NVPHRLEYVV NNQCYDGHDG MQLQTNNLVH LQNAGDGGEY  300
HQPYVRKYAD GSKESVSWNE VLESCEASSG LEYEEKPQPY LREPAEEHEY SGWLNFDEIN  360
VRNSSVLLPQ EVENFEIPAY SSVMGTHETN PDYYSMLYDQ GQLGVPIEAD SSLTIARQQK  420
FTIREISPEW GFTSEATKVI VVGSFLCDPS ESAWTCMFGD TEVPIEIIQE GVLRCEAPPH  480
LPGKVTCCIT SGNRESCSEI REFEYRAKSS FPHCNSSQME VAESPEELLL LVRFVQMLLS  540
DSSLQKEDSI ETGIQLLRKL KTDDDSWGSI IGALLVGNGT STGTVDWLLQ QLLKDKLQQW  600
LSSKSQERQD QPNCNLSKKE QGIIHMVAGL GYEWALSAIL SHRVSIDFRD INGWTALHWA  660
ARFGREKMVA ALIASGASAG AVTDPTSRDP IGKTPASIAA SSGHKGLAGY LSEVALTSHL  720
SSLTLEESEL SKGSAEAEAE RTVDAISKGN FAANEDQASL KDTLAAVRNA AQAAARIQSA  780
FRAHSFRKRQ EREALTSTNS IDEYGVISGD IQGLSAMSKL AFRNARDYNL AALSIQKKYR  840
GWKGRKDFLA FRQKVVKIQA HVRGYQVRKH YKVICWAVGI LDKVVLRWRR KGAGLRGFRN  900
DVEPIDESED EDILKVFRKQ KVDGAIDESV SRVLSMVDSP EARQQYQRML ERYRQAKAEL  960
GETSEAAATS LDDMENDDMY HFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein