PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643993.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 217aa    MW: 24866.6 Da    PI: 9.4733
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643993.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.31.2e-191962649
                    HHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  6 ksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +sn  vtfskRr gi+KKA+EL +LC+aev +iifs++ k++ +
  XP_021643993.1 19 ESNLLVTFSKRRYGIFKKASELTTLCGAEVTIIIFSPSMKVFSF 62
                    68889*********************************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MSRRSKGRQK LDMVKIPRES NLLVTFSKRR YGIFKKASEL TTLCGAEVTI IIFSPSMKVF  60
SFGHPSVEAV IDRFLAGNPP QPSSCALQLI EAHRNARVRE LNMQLAQVMN QLEMEKKRGE  120
ELDKMRKVGA EQCWWESPIE ELDVPRLEQL KAALEVLRQN VAKLDDRFLI QSTNHPYFYN  180
SKPETGAFPF NLSNEGFNTN MMPYNFDLGF PSRSGFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-60M-type_MADS family protein