PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643804.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 647aa MW: 74377.3 Da PI: 8.697

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68	2.4e-21	98	191	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+A+++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ + +w+vt + ++HnHel XP_021643804.1 98 DFYCEFARRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKTSNESKPQRNRKSSRCGCQAYMRISKTTelgTTEWRVTGFANHHNHELL 191 6************9998877356667999**********999999****************9989999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MTGLLFFTFV LKDIVGIFRR IEKCSKLTSH RLMRNMMSEE AGQMLVVYDE PSEQQSLSLD 60 DTSSTEESPD ETRLSLESNN DVIPYIGQRF ATHDAAYDFY CEFARRCGFS IRRHRTEGKD 120 GVGKGLTRRY FVCHRAGNTP VKTSNESKPQ RNRKSSRCGC QAYMRISKTT ELGTTEWRVT 180 GFANHHNHEL LEPNQVRFLP AYRTISDMDK SRILMFAKTG ISVQQMMRLM ELEKCVEPGY 240 LPFTEKDVRN LLQSFRKLDP EDESIDLLRM CRNIKEKDPN FKFEYTLDSN NKLENIAWSY 300 ASSIQSYEIF GDAVVFDTTH RLAAFDMPLG IWVGVNNYGM PCFFGCVLLR EENLRSLSWA 360 LKAFLGFMNG KAPQTILTDQ NMCLKEATAM EMPTTKHALC IWMIVAKFPS WFNAVLGERY 420 NDWKAEFHRL YNLESIEDFE LGWRDMVNSF GLHNNRHITN LYALRTLWAL PYLRSHFFAG 480 MTAAGHSKSI NAFIQRFLSA QTRLAHFVEQ VAVAIDFKDQ AADQQTMQQN LQNVCLKTGA 540 PMESHAATVL TPYAFSKLRA TYFRKKYRKI STSPAKLLHN SPNVHRERMQ LLQNMVSTLI 600 TESSKSKERL DMATDQVSIL LSRIREQPVP SHGVVGVELL AGKCIFL

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MTGLLFFTFV LKDIVGIFRR IEKCSKLTSH RLMRNMMSEE AGQMLVVYDE PSEQQSLSLD  60
DTSSTEESPD ETRLSLESNN DVIPYIGQRF ATHDAAYDFY CEFARRCGFS IRRHRTEGKD  120
GVGKGLTRRY FVCHRAGNTP VKTSNESKPQ RNRKSSRCGC QAYMRISKTT ELGTTEWRVT  180
GFANHHNHEL LEPNQVRFLP AYRTISDMDK SRILMFAKTG ISVQQMMRLM ELEKCVEPGY  240
LPFTEKDVRN LLQSFRKLDP EDESIDLLRM CRNIKEKDPN FKFEYTLDSN NKLENIAWSY  300
ASSIQSYEIF GDAVVFDTTH RLAAFDMPLG IWVGVNNYGM PCFFGCVLLR EENLRSLSWA  360
LKAFLGFMNG KAPQTILTDQ NMCLKEATAM EMPTTKHALC IWMIVAKFPS WFNAVLGERY  420
NDWKAEFHRL YNLESIEDFE LGWRDMVNSF GLHNNRHITN LYALRTLWAL PYLRSHFFAG  480
MTAAGHSKSI NAFIQRFLSA QTRLAHFVEQ VAVAIDFKDQ AADQQTMQQN LQNVCLKTGA  540
PMESHAATVL TPYAFSKLRA TYFRKKYRKI STSPAKLLHN SPNVHRERMQ LLQNMVSTLI  600
TESSKSKERL DMATDQVSIL LSRIREQPVP SHGVVGVELL AGKCIFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein