PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643744.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 549aa MW: 59977.1 Da PI: 6.7932

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.2	9.3e-16	339	385	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq XP_021643744.1 339 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 385 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 549 aa Download sequence
MNHYVSDFEK DDDCAIPTSS TLTRSKRSIT SEDEIMELLW QNGQVVVQSQ TQMSLKKSQH 60 HKYDNTVLPI EQSTPREIRS SHEQQQHLLM QEDEMAPWLH YPLNDTNFDQ DFCADLLYPS 120 TACVTSTTTN TSAAPIRSTH NPEARLHPAV SAATATATAT NTATASRPPI PPTRRAEVVQ 180 NFAYFSRHRA RGGVSESGPS NLKTVLKEST VVDSSDTPAM VSESRISEAA FARSTAGVSS 240 GDNACGIMSG AAVAGTSSRG GGSNNKDLIT CEMTVTSSPG GSSASAEPPS QKLATDDRKR 300 KGREDETEYH SEDVEFESTD AKRQLRGSTS MKRSRAAEVH NLSERRRRDR INEKMRALQE 360 LIPRCNKSDK ASMLDEAIEY LKSLQLQIQM MSMGCSMVPM MFPGIQQYML PLGMGMGMGM 420 GTEMGMNRPM MPFPNVLAGA PMPTPAAAAH LGPRFPNPTF HMPTIPAPAP DPSRIQATNQ 480 SDPMLSAIGT QNPNLQHRVL NFSDPYQQYL GLQQTQTPVS QNQAKTRPIT SKPGTSQAAE 540 NLDNHQSGT

Sequence ? help Back to Top

Protein Sequence Length: 549 aa Download sequence

MNHYVSDFEK DDDCAIPTSS TLTRSKRSIT SEDEIMELLW QNGQVVVQSQ TQMSLKKSQH  60
HKYDNTVLPI EQSTPREIRS SHEQQQHLLM QEDEMAPWLH YPLNDTNFDQ DFCADLLYPS  120
TACVTSTTTN TSAAPIRSTH NPEARLHPAV SAATATATAT NTATASRPPI PPTRRAEVVQ  180
NFAYFSRHRA RGGVSESGPS NLKTVLKEST VVDSSDTPAM VSESRISEAA FARSTAGVSS  240
GDNACGIMSG AAVAGTSSRG GGSNNKDLIT CEMTVTSSPG GSSASAEPPS QKLATDDRKR  300
KGREDETEYH SEDVEFESTD AKRQLRGSTS MKRSRAAEVH NLSERRRRDR INEKMRALQE  360
LIPRCNKSDK ASMLDEAIEY LKSLQLQIQM MSMGCSMVPM MFPGIQQYML PLGMGMGMGM  420
GTEMGMNRPM MPFPNVLAGA PMPTPAAAAH LGPRFPNPTF HMPTIPAPAP DPSRIQATNQ  480
SDPMLSAIGT QNPNLQHRVL NFSDPYQQYL GLQQTQTPVS QNQAKTRPIT SKPGTSQAAE  540
NLDNHQSGT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	344	349	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	2e-74	bHLH family protein