PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021643710.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YA | ||||||||
Protein Properties | Length: 263aa MW: 29541.1 Da PI: 8.2295 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.5 | 9.3e-33 | 111 | 167 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekkl +k rkpylheSRh hA+rR Rg+gGrF XP_021643710.1 111 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKVRKPYLHESRHLHAMRRVRGCGGRF 167 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 263 aa Download sequence |
MLEESMTNLW TSKYKDGGFE GKASKSQAVK YQVDEGINAY KEIQFTVFPQ LDGKCGEEHQ 60 HPQHSVSFMS PTMVEYLAPP TQQEHVGHSF VHSHCFGAYP TRMVLPLEMT EEPVYVNAKQ 120 YHGILRRRQS RAKAELEKKL IKVRKPYLHE SRHLHAMRRV RGCGGRFINT KKLENGAANT 180 TSDMVNSFSE TVPKPSTNSS SAHSSKNADP AAGNAAIESP QLTYTSGNGN GCYQSFLGFQ 240 LSSYHSQSDG MVEERDCNMK ELW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 2e-35 | NF-YA family protein |