PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021643561.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | FAR1 | ||||||||
Protein Properties | Length: 251aa MW: 28485.2 Da PI: 6.7959 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.7 | 7e-27 | 87 | 174 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+ +GF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ ++k +gkw+vtk+++eH+H+l+p XP_021643561.1 87 FYNAYATCLGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILLRKVGSGKWVVTKFVKEHTHPLTP 174 ******************************************9988..9**************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEFGVNGDAS GVMVGTVELE DSRAGHENEI GVISAEEDFQ QDQDDKVDKE TLGKDAIMDG 60 VPSVAMAPAD EPYVGQEFES EAAAHAFYNA YATCLGFIIR VSKLSRSRRD GSAIGRALVC 120 NKEGYRMPDK REKIVRQRAE TRVGCRAMIL LRKVGSGKWV VTKFVKEHTH PLTPGKGRRD 180 CIYDQYPNEH DKIRELSQQL AIEKKRAATY KRHLELIFEH IEEHNNSLSK KIQHIVDNVR 240 EMEKKEEQNR V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-90 | FAR1 family protein |