PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021643260.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 839aa    MW: 92688.2 Da    PI: 6.4664
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021643260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.25.1e-171876357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++ +++ps  +r++  +++    +++ +q+kvWFqNrR +ek+
  XP_021643260.1 18 KYVRYTPEQVEALERLYHDCPKPSSIRRQQFIRECpmlsNVEPKQIKVWFQNRRCREKQ 76
                    5679*****************************************************97 PP
2START181.45.3e-571623702205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++l+v+ ++  g+++l 
  XP_021643260.1 162 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVAARACGLVGLEPT-RVAEILKDRPSWFRDCRAVDVLNVLPTAngGTIELL 255
                     789*******************************************************.8888888888****************9999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++vi+++S+ ++q+ p+    +++vRae+lpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_021643260.1 256 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVICERSLKNTQNGPSmppVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 350
                     *******************************************9988899********************************************* PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+++ ++kt++a+l+++++
  XP_021643260.1 351 ESSTVLAQKTTMAALRQLRQ 370
                     ****************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MAMYCKDGKQ PANLDNAKYV RYTPEQVEAL ERLYHDCPKP SSIRRQQFIR ECPMLSNVEP  60
KQIKVWFQNR RCREKQRKEA SRLQAVNRKL TAMNKLLMEE NDRLQKQVSQ LVYENGYFRQ  120
HTQNTTLATK DTSCESVVTS GQHHLTPQHP PRDASPAGLL SIAEETLTEF LSKATGTAVE  180
WVQMPGMKPG PDSIGIIAIS HGCTGVAARA CGLVGLEPTR VAEILKDRPS WFRDCRAVDV  240
LNVLPTANGG TIELLYMQLY APTTLAPARD FWLLRYTSVL EDGSLVICER SLKNTQNGPS  300
MPPVQHFVRA EMLPSGYLIR PCEGGGSIIH IVDHMDLEPW SVPEVLRPLY ESSTVLAQKT  360
TMAALRQLRQ IAQEVSQSNV TNWGRRPAAL RSLSQRLSRG FNEALNGFTD EGWSMMGNDG  420
MDDVTVLVNS SPEKLMGLNL SFTNGFPAVS NAVLCAKASM LLQNVPPAIL LRFLREHRSE  480
WADNNIDAYS AAAIKVGPCS LPGSRVGSFG GQVILPLAHT IEHEEFLEVI KLEGVGHSPE  540
DPMMPRDMFL LQLCSGMDEN AIGTCAELIF APIDASFADD APLLPSGFRI IPLDSAKEAS  600
SPNRTLDLAS ALETGPAGNK SSTDYTANSG CMRSVMTIAF EFAFESHMQD HVASMARQYV  660
RSIISSVQRV ALALSPSHLG SHAGLRPPLG TPEAQTLARW ICQSYRCYLG VELLKSSSEG  720
SETILKTLWH HSDAIMCCSL KALPVFTFAN QAGLDMLETT LVALQDITLE KIFDDHGRKT  780
LCSEFPQITQ QGFACLQGGI CLSSMGRPVS YERAVAWKVL NEEETAHCIC FMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein