PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021643102.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 352aa MW: 39757.7 Da PI: 7.2795

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021643102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.1	1.4e-15	44	103	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_021643102.1 44 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEETAAHAYDLAALKYWG 103 57*****************999955656446***********************98 PP
2	AP2	51.3	3e-16	146	197	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_021643102.1 146 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 197 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAKISQQSQR NSSTANTGAN PTTTTKTKRT RKTVPRDSPP QRSSIYRGVT RHRWTGRYEA 60 HLWDKNCWNE SQNKKGRQVY LGAYDDEETA AHAYDLAALK YWGQETILNF PLSTYQEELK 120 DMEGQSKEEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT 180 QEEAATAYDM AAIEYRGLNA VTNFDLSRYI KWLRPNTQND PHQNPYTSDN ANLIPNPTQD 240 LGLSFTSHQQ SLSETETAMP PPRHTGGSGG SASSALGLLL QSSKFKEMLE RTSANDCPLT 300 PPESDPPRRS FPDDIQTYFD CQDSDNFAGG DDIIFGELNT FASPIFQYEL DC

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAKISQQSQR NSSTANTGAN PTTTTKTKRT RKTVPRDSPP QRSSIYRGVT RHRWTGRYEA  60
HLWDKNCWNE SQNKKGRQVY LGAYDDEETA AHAYDLAALK YWGQETILNF PLSTYQEELK  120
DMEGQSKEEY IGSLRRKSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT  180
QEEAATAYDM AAIEYRGLNA VTNFDLSRYI KWLRPNTQND PHQNPYTSDN ANLIPNPTQD  240
LGLSFTSHQQ SLSETETAMP PPRHTGGSGG SASSALGLLL QSSKFKEMLE RTSANDCPLT  300
PPESDPPRRS FPDDIQTYFD CQDSDNFAGG DDIIFGELNT FASPIFQYEL DC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-115	AP2 family protein