PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642782.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 227aa MW: 25754.7 Da PI: 8.4715 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.6 | 1.7e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCdaeva+iifs tgkl+ey+s XP_021642782.1 9 KKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVALIIFSATGKLFEYCS 59 68***********************************************96 PP | |||||||
2 | K-box | 44.8 | 5.5e-16 | 89 | 170 | 17 | 98 |
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ a+L ke+ + ++R++ Ge+L+ L+l+eLqqLe+ Le +l+++ ++K + ++++i+ l kk +l eenk+L++k+ XP_021642782.1 89 ENNNRARLTKEVAEKTYQLRQMRGENLQGLNLEELQQLEKLLEAGLTRVLETKGDKIMNEISMLEKKGAQLLEENKRLKQKM 170 567788999999999999**************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MAREKIKIKK IDNITARQVT FSKRRRGLFK KAEELSVLCD AEVALIIFSA TGKLFEYCSS 60 SMKDIIARYN LHSNNLDKLD RPSLELELEN NNRARLTKEV AEKTYQLRQM RGENLQGLNL 120 EELQQLEKLL EAGLTRVLET KGDKIMNEIS MLEKKGAQLL EENKRLKQKM TTFWCKGKRP 180 VHLESDVAVQ QEEGMSSESV TNICSCSSGP PLGDDSSDTS LKLGLPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-79 | MIKC_MADS family protein |