PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021642736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 365aa MW: 37952.5 Da PI: 7.9213 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.4 | 3.8e-19 | 12 | 57 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l +v+++G+++W++I++ ++ gR++k+c++rw + XP_021642736.1 12 KGPWSPEEDEALQMLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 57 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.1 | 8.5e-18 | 66 | 108 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEde +++a++ +G++ W+tIar ++ gRt++ +k++w++ XP_021642736.1 66 AFTPEEDETIIRAHAHFGNK-WATIARLLN-GRTDNAIKNHWNST 108 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 365 aa Download sequence |
MAVTGKDVDR IKGPWSPEED EALQMLVQKH GPRNWSLISK SIPGRSGKSC RLRWCNQLSP 60 QVEHRAFTPE EDETIIRAHA HFGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSSMVDD 120 VSFGSRDAYD GNLGGNGQPL KRSVSAGSGM PVSTGLYMNP GSPSGSDVSD SSVPVLSSSH 180 VYRPVPRAAP VFPPVETTSS SNNNDPPTSL SLSLPGADSS EVSNRAAEST PVRVTESTPA 240 TNTISLVPAM NQVSLAPAQV EEAAAAVAAG MQQGAVNGGV GGGFVGFTAE FMAVMHEMIK 300 MEVRNYMMEQ SRGGGSGGGV GMCRVGGGGG GGGGSGGGVG MCFQAAGGEG FRNVAMNRIG 360 VSKIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37260.1 | 3e-82 | MYB family protein |