PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642531.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 492aa MW: 54947.4 Da PI: 6.9672

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.1e-07	274	295	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_021642531.1 274 FCTICGKGFKRDANLRMHMRGH 295 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MMDHMDTLCQ ETWAKSSSSG NELAKNIPTK KPSFTNYNLD SHQHQQKWED TSIFGIRTDT 60 PFQEFNPQSE TQSLLPSNPN DHIKIVDRKN SQINETLQIN KIPDWDPRAM LNNLSFLEQK 120 IHQLQDLVHL IVGRRSQVPG QPEELVTQQQ QLITADLTSI IGQLITTSGS LLPSVKHTLS 180 ATTPPLGQLG GILFPSGTGM NSRLQRQHSS GTKVSDQSNQ MDVTGNYGTE QNYSIEEHEM 240 KEEDDADEGE NLPPGSYEIL QLEKEEILAP HAHFCTICGK GFKRDANLRM HMRGHGDEYK 300 TPAALAKPNK EASSEPVLIK RYSCPFAGCR RNKDHKKFQA LKTILCVKNH YKRTHCDKSY 360 TCSRCNTKKF SVIADLKTHE KHCGKDRWLC SCGTTFSRKD KLFGHIALFQ GHTPAIPRDE 420 TKGLSSGPSD KGEENDVSNK VGSTNYSFGS SDATGSGAQN IMDVKVGVDD PASYFSPLNF 480 DTCNFGGFHE YP

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MMDHMDTLCQ ETWAKSSSSG NELAKNIPTK KPSFTNYNLD SHQHQQKWED TSIFGIRTDT  60
PFQEFNPQSE TQSLLPSNPN DHIKIVDRKN SQINETLQIN KIPDWDPRAM LNNLSFLEQK  120
IHQLQDLVHL IVGRRSQVPG QPEELVTQQQ QLITADLTSI IGQLITTSGS LLPSVKHTLS  180
ATTPPLGQLG GILFPSGTGM NSRLQRQHSS GTKVSDQSNQ MDVTGNYGTE QNYSIEEHEM  240
KEEDDADEGE NLPPGSYEIL QLEKEEILAP HAHFCTICGK GFKRDANLRM HMRGHGDEYK  300
TPAALAKPNK EASSEPVLIK RYSCPFAGCR RNKDHKKFQA LKTILCVKNH YKRTHCDKSY  360
TCSRCNTKKF SVIADLKTHE KHCGKDRWLC SCGTTFSRKD KLFGHIALFQ GHTPAIPRDE  420
TKGLSSGPSD KGEENDVSNK VGSTNYSFGS SDATGSGAQN IMDVKVGVDD PASYFSPLNF  480
DTCNFGGFHE YP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein