PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642454.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB_related
Protein Properties Length: 87aa    MW: 9572.62 Da    PI: 5.8641
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.4e-101257245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     g+WT++  + + +a   +  +   +W+ Iar +g g+t++++k ++ 
   XP_021642454.1 12 GSWTAQQNKAFENALVVYEEDtpdRWANIARAVG-GKTAEEVKRHYE 57
                     89******************9*************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MASKSTSSGG SGSWTAQQNK AFENALVVYE EDTPDRWANI ARAVGGKTAE EVKRHYELLV  60
EDIKNIESGQ VPLPNYESTI TRGRAKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-34MYB_related family protein