PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642415.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 437aa MW: 48067.5 Da PI: 6.0917 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53 | 7.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+ +++++G g W+t +++ g+ R++k+c++rw +yl XP_021642415.1 14 KGAWTADEDQKLIAYIQEHGEGGWRTLPQKAGLQRCGKSCRLRWANYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 60 | 5e-19 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++teE+++++++++ lG++ W++Iar+++ +Rt++++k++w+++l XP_021642415.1 67 RGEFSTEEEQKIIQLHASLGNR-WSAIARHLP-NRTDNEIKNYWNTHL 112 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence |
MGRTPCCNAD GLKKGAWTAD EDQKLIAYIQ EHGEGGWRTL PQKAGLQRCG KSCRLRWANY 60 LRPDIKRGEF STEEEQKIIQ LHASLGNRWS AIARHLPNRT DNEIKNYWNT HLKKRLAETG 120 IDPVTHKPVG PSSTPTATAI SSCSAAHMSP QSELAQPTLR PAASASTQAQ LLNRLAAKLA 180 PSKCLQAIKT SQNLVQVLST EAEKDVVDVS ISTPDMPKRP ISSTSARLLN TMARRLTTPL 240 HCLNTLKSIL SGSSDDQSAG NKVIEPYHDF MHRSASASSL SEAASDMSRS NAISTHDFSP 300 LMESFDLDLL KDWNGVSDGG VSSTSMGDTY SSCWESPVSP LNNFIKNNNA ASTFSGSESM 360 GEVNDALITA RTYDREMTFG HTQYDYYFLD GFSNFCINGV SSCSEDSHEG KVFEDATYSW 420 NNDPFIENYQ LPDLDIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61420.2 | 3e-78 | MYB family protein |