PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642404.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 443aa MW: 48287.7 Da PI: 4.8846

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv +++++G g W+t +++ g+ R++k+c++rw +yl XP_021642404.1 14 KGAWTADEDHKLVAYIQEHGEGGWRTLPQKAGLQRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	58.8	1.2e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE+e+++++++ lG++ W++Iar+++ +Rt++++k++w+++l XP_021642404.1 67 RGEFSAEEEEKIIELHASLGNR-WSAIARHLP-KRTDNEIKNYWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGRTPCCNEA GLKKGAWTAD EDHKLVAYIQ EHGEGGWRTL PQKAGLQRCG KSCRLRWANY 60 LRPDIKRGEF SAEEEEKIIE LHASLGNRWS AIARHLPKRT DNEIKNYWNT HLKKRLVDMG 120 IDPVTHKQIG PSPTSPPNDN SCNVNEERSG SEFMPIQRST STSAKLLNRV SAKFAQMQRK 180 EMATSRPTPS PCLDAIKALL LNSAKDSIIG SGSSGGGGGG DDSDVEILPS RPISRSSSSR 240 ILLNKMASKL APSKSLDLLK NSLSVPSMAS TSVSDTSTTV GSYNNIDSPI SISDFLESMP 300 TSSSACESSE FTGNLGMGED QVNEAIAALH QAMELDTTTP QEYPMYASYE LEELLGDFGG 360 EDGANFTSAV SQSKAGDSQV AISMEPTSDF IEKFTNMPFG CSPNEYSTIK DYYHGKEESN 420 SGALEVNMNY WNEDLDSVNF AMQ

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGRTPCCNEA GLKKGAWTAD EDHKLVAYIQ EHGEGGWRTL PQKAGLQRCG KSCRLRWANY  60
LRPDIKRGEF SAEEEEKIIE LHASLGNRWS AIARHLPKRT DNEIKNYWNT HLKKRLVDMG  120
IDPVTHKQIG PSPTSPPNDN SCNVNEERSG SEFMPIQRST STSAKLLNRV SAKFAQMQRK  180
EMATSRPTPS PCLDAIKALL LNSAKDSIIG SGSSGGGGGG DDSDVEILPS RPISRSSSSR  240
ILLNKMASKL APSKSLDLLK NSLSVPSMAS TSVSDTSTTV GSYNNIDSPI SISDFLESMP  300
TSSSACESSE FTGNLGMGED QVNEAIAALH QAMELDTTTP QEYPMYASYE LEELLGDFGG  360
EDGANFTSAV SQSKAGDSQV AISMEPTSDF IEKFTNMPFG CSPNEYSTIK DYYHGKEESN  420
SGALEVNMNY WNEDLDSVNF AMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07690.1	1e-72	MYB family protein