PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642386.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 225aa MW: 25768.4 Da PI: 10.1174

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642386.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.8	6.1e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev viifsstgkly+++s XP_021642386.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGKLYDFAS 59 8***********************************************86 PP
2	K-box	87.9	2e-29	81	169	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 ++ + +q+e+a L+++++nLq+++R+++Ge+L+ Ls+keLq+Le++Le sl+ +R+kK+++l+++i+el +k + +++en +L kk XP_021642386.1 81 SPMSEVKFWQREAAMLRQQLQNLQENHRQMMGEELSGLSIKELQNLESRLEMSLRGVRTKKDQILMDEIQELNRKGNLIHQENVELYKK 169 5667899*******************************************************************************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVIIFSS TGKLYDFAST 60 SMKSVIERYN KSKEEQHQIG SPMSEVKFWQ REAAMLRQQL QNLQENHRQM MGEELSGLSI 120 KELQNLESRL EMSLRGVRTK KDQILMDEIQ ELNRKGNLIH QENVELYKKA YGAGNINGVN 180 RDYPRTNGLG IVEESNVPVH LQLSQPQQQN YDTQARATKL GLQLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-103	MIKC_MADS family protein