PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | YABBY | ||||||||
Protein Properties | Length: 169aa MW: 18773.5 Da PI: 8.9609 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 146 | 3.9e-45 | 10 | 153 | 2 | 163 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 d++ se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + + + ++l +++++ s k +s+s+s XP_021642286.1 10 DLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPL---------QGQCL---DHQLILQKQDFFSDLRKGQSSSSSC 92 77899*************************************98553333322.........22222...2234444555555444444443333 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +s + +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + XP_021642286.1 93 TS------GEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 153 33......4456799999***********************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MNLEEKATMD LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCLDHQ LILQKQDFFS DLRKGQSSSS SCTSGEPLSP KAPFVVKPPE KKHRLPSAYN 120 RFMKEEIQRI KAANPEIPHR EAFSTAAKNW ARYIPNSAPG SVSGRSNSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 2e-69 | YABBY family protein |