PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642269.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family RAV
Protein Properties Length: 330aa    MW: 38678.6 Da    PI: 9.6569
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.72.5e-124289154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                    s+++GV w + +g+W A+I        +k ++lg+++ +eeAa a+++a+ kl 
  XP_021642269.1 42 SKFRGVIWLR-SGKWGARIAFK-----YKAYWLGTYDMEEEAAMAYDRAAIKLQ 89
                    79******99.7******9993.....5**********************9985 PP
2B366.83e-21161259187
                     EEEE-..-HHHHTT-EE--HHH.HTT..............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                     f k+lt+ dv+  + + +pk++a e+              +   ++s++lt+ d++ r W+++++y+k+ +++v+tkGW++F k n+Lk +D v 
  XP_021642269.1 161 FRKELTQTDVTHIKGFHIPKEHAMEYfpplagvnssggdeS--GNKSIELTFFDRHCRPWTFRYSYWKSTQTFVFTKGWRHFLKMNNLKPKDCVF 253
                     889****************************9999976432..348999********************************************** PP

                     EEE-SS CS
              B3  82 Fkldgr 87 
                     F++ ++
  XP_021642269.1 254 FYRCEH 259
                     *95532 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MEVERNSDSR VSTTMESSNM NIISTNQQST EHDSSSGRGT SSKFRGVIWL RSGKWGARIA  60
FKYKAYWLGT YDMEEEAAMA YDRAAIKLQR SDAPLNFPMT IYTVQETKFQ SRYSNEEILD  120
MIKDKTYLSK FSNYLANQSL LREYAANNPA NQQGISYQML FRKELTQTDV THIKGFHIPK  180
EHAMEYFPPL AGVNSSGGDE SGNKSIELTF FDRHCRPWTF RYSYWKSTQT FVFTKGWRHF  240
LKMNNLKPKD CVFFYRCEHQ REAKGRVFYM IDAQRSNMEI NAVTWNIQKE TYAKKRTNHE  300
VDGEDKEPDN GVKLFGVQIS KRRPNYKLFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.19e-56RAV family protein